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    PVRL4 poliovirus receptor-related 4 [ Ovis aries (sheep) ]

    Gene ID: 101123428, updated on 15-Jul-2015
    Gene symbol
    PVRL4
    Gene description
    poliovirus receptor-related 4
    See related
    Ensembl:ENSOARG00000009471
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Also known as
    nectin-4
    Orthologs
    See PVRL4 in MapViewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Oar_v3.1 (GCF_000298735.1) 1 NC_019458.1 (110633993..110658776, complement)
    101 current Oori1 (GCF_000765115.1) Unplaced Scaffold NW_011943362.1 (287566..312336)

    Chromosome 1 - NC_019458.1Genomic Context describing neighboring genes Neighboring gene thiosulfate sulfurtransferase (rhodanese)-like domain containing 1 Neighboring gene upstream transcription factor 1 Neighboring gene Rho GTPase activating protein 30 Neighboring gene uncharacterized LOC105613269 Neighboring gene uncharacterized LOC105613267 Neighboring gene kelch domain containing 9 Neighboring gene prefoldin subunit 2 Neighboring gene nitrilase 1

    • Adherens junction, organism-specific biosystem (from KEGG)
      Adherens junction, organism-specific biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
    • Adherens junction, conserved biosystem (from KEGG)
      Adherens junction, conserved biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....

    RefSeqs of Annotated Genomes: Ovis aries Annotation Release 101

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oar_v3.1 Primary Assembly

    Genomic

    1. NC_019458.1 Reference Oar_v3.1 Primary Assembly

      Range
      110633993..110658776
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012184682.1XP_012040072.1  

      See identical proteins and their annotated locations for XP_012040072.1

      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    2. XM_012184692.1XP_012040082.1  

      See identical proteins and their annotated locations for XP_012040082.1

      UniProtKB/TrEMBL
      W5PIA2
      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    3. XM_012184689.1XP_012040079.1  

      See identical proteins and their annotated locations for XP_012040079.1

      UniProtKB/TrEMBL
      W5PIA2
      Related
      ENSOARP00000010170, ENSOART00000010319
      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    4. XM_004002680.2XP_004002729.1  

      See identical proteins and their annotated locations for XP_004002729.1

      UniProtKB/TrEMBL
      M1PNK8
      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    5. XM_012184678.1XP_012040068.1  

      See identical proteins and their annotated locations for XP_012040068.1

      Conserved Domains (4) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      pfam13895
      Location:304366
      Ig_2; Immunoglobulin domain
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    6. XM_012184662.1XP_012040052.1  

      See identical proteins and their annotated locations for XP_012040052.1

      Conserved Domains (3) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    7. XM_012184670.1XP_012040060.1  

      See identical proteins and their annotated locations for XP_012040060.1

      Conserved Domains (4) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      pfam13895
      Location:304366
      Ig_2; Immunoglobulin domain
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    8. XM_012184656.1XP_012040046.1  

      See identical proteins and their annotated locations for XP_012040046.1

      Conserved Domains (3) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    9. XM_012184697.1XP_012040087.1  

      See identical proteins and their annotated locations for XP_012040087.1

      Conserved Domains (3) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    10. XM_012184705.1XP_012040095.1  

      See identical proteins and their annotated locations for XP_012040095.1

      Conserved Domains (4) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      pfam13895
      Location:304366
      Ig_2; Immunoglobulin domain
      cl11960
      Location:83183
      Ig; Immunoglobulin domain

    Alternate Oori1

    Genomic

    1. NW_011943362.1 Alternate Oori1

      Range
      287566..312336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012168145.1XP_012023535.1  

      See identical proteins and their annotated locations for XP_012023535.1

      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    2. XM_012168147.1XP_012023537.1  

      See identical proteins and their annotated locations for XP_012023537.1

      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    3. XM_012168146.1XP_012023536.1  

      See identical proteins and their annotated locations for XP_012023536.1

      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    4. XM_012168142.1XP_012023532.1  

      See identical proteins and their annotated locations for XP_012023532.1

      Conserved Domains (3) summary
      cd07704
      Location:148241
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:258331
      IG_like; Immunoglobulin like
      cl11960
      Location:45145
      Ig; Immunoglobulin domain
    5. XM_012168140.1XP_012023530.1  

      See identical proteins and their annotated locations for XP_012023530.1

      Conserved Domains (3) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    6. XM_012168143.1XP_012023533.1  

      See identical proteins and their annotated locations for XP_012023533.1

      Conserved Domains (4) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      pfam13895
      Location:304366
      Ig_2; Immunoglobulin domain
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    7. XM_012168141.1XP_012023531.1  

      See identical proteins and their annotated locations for XP_012023531.1

      Conserved Domains (3) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    8. XM_012168144.1XP_012023534.1  

      See identical proteins and their annotated locations for XP_012023534.1

      Conserved Domains (4) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      pfam13895
      Location:304366
      Ig_2; Immunoglobulin domain
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    9. XM_012168148.1XP_012023538.1  

      See identical proteins and their annotated locations for XP_012023538.1

      Conserved Domains (3) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      cl11960
      Location:83183
      Ig; Immunoglobulin domain
    10. XM_012168149.1XP_012023539.1  

      See identical proteins and their annotated locations for XP_012023539.1

      Conserved Domains (4) summary
      cd07704
      Location:186279
      Ig2_Nectin-3-4_like; Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins
      smart00410
      Location:296369
      IG_like; Immunoglobulin like
      pfam13895
      Location:304366
      Ig_2; Immunoglobulin domain
      cl11960
      Location:83183
      Ig; Immunoglobulin domain