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Cpt1b carnitine palmitoyltransferase 1b, muscle [ Mus musculus (house mouse) ]

Gene ID: 12895, updated on 19-Sep-2014
Official Symbol
Cpt1bprovided by MGI
Official Full Name
carnitine palmitoyltransferase 1b, muscleprovided by MGI
Primary source
MGI:MGI:1098297
See related
Ensembl:ENSMUSG00000078937; Vega:OTTMUSG00000035434
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cpt1; Cpti; Cpt1-m; Cpti-m; M-cpti
See Cpt1b in Epigenomics, MapViewer
Location:
15 E3; 15 44.89 cM
Exon count:
19
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 15 NC_000081.6 (89416405..89425862, complement)

Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene kelch domain containing 7B Neighboring gene synaptonemal complex central element protein 3 Neighboring gene Chkb-Cpt1b readthrough transcript (NMD candidate) Neighboring gene choline kinase beta Neighboring gene mitogen-activated protein kinase 8 interacting protein 2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Readthrough ChkbCpt1b

Readthrough gene: ChkbCpt1b, Included gene: Chkb

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
carnitine O-palmitoyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
carnitine O-palmitoyltransferase activity TAS
Traceable Author Statement
more info
PubMed 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
long-chain fatty acid transport ISO
Inferred from Sequence Orthology
more info
 
long-chain fatty acid transport TAS
Traceable Author Statement
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial outer membrane TAS
Traceable Author Statement
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
carnitine O-palmitoyltransferase 1, muscle isoform
Names
carnitine O-palmitoyltransferase 1, muscle isoform
muscle-type carnitine palmitoyltransferase I
NP_034078.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009948.2NP_034078.2  carnitine O-palmitoyltransferase 1, muscle isoform

    See proteins identical to NP_034078.2

    Status: VALIDATED

    Source sequence(s)
    AK029141, CJ092541, CJ238532
    Consensus CDS
    CCDS27749.1
    UniProtKB/Swiss-Prot
    Q924X2
    Related
    ENSMUSP00000104936, OTTMUSP00000049742, ENSMUST00000109313, OTTMUST00000090606
    Conserved Domains (1) summary
    pfam00755
    Location:172763
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000081.6 

    Range
    89416405..89425862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000037.1 

    Range
    91545496..91554925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)