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CLMP CXADR-like membrane protein [ Homo sapiens (human) ]

Gene ID: 79827, updated on 11-Sep-2014
Official Symbol
CLMPprovided by HGNC
Official Full Name
CXADR-like membrane proteinprovided by HGNC
Primary source
HGNC:HGNC:24039
Locus tag
UNQ318/PRO363
See related
HPRD:16513; MIM:611693; Vega:OTTHUMG00000166031
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACAM; ASAM; CSBM; CSBS
Summary
The CTX (see VSIG2, MIM 606011) family of proteins, including ASAM, are type I transmembrane proteins within the Ig superfamily that localize to junctional complexes between endothelial and epithelial cells and may play a role in cell-cell adhesion (Raschperger et al., 2004 [PubMed 14573622]).[supplied by OMIM, Mar 2008]
See CLMP in Epigenomics, MapViewer
Location:
11q24.1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 11 NC_000011.10 (123072312..123195299, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (122943020..123066007, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929289 Neighboring gene small nucleolar RNA, C/D box 14D Neighboring gene small nucleolar RNA, C/D box 14C Neighboring gene heat shock 70kDa protein 8 Neighboring gene microRNA 4493 Neighboring gene GRAM domain containing 1B Neighboring gene splicing factor 3a, subunit 3 pseudogene 2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ22415

Gene Ontology Provided by GOA

Process Evidence Code Pubs
digestive tract development IMP
Inferred from Mutant Phenotype
more info
 
Component Evidence Code Pubs
cell surface IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasmic microtubule IDA
Inferred from Direct Assay
more info
 
extracellular vesicular exosome IDA
Inferred from Direct Assay
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
tight junction IDA
Inferred from Direct Assay
more info
 
Preferred Names
CXADR-like membrane protein
Names
CXADR-like membrane protein
CAR-like membrane protein
adipocyte adhesion molecule
adipocyte-specific adhesion molecule
coxsackie- and adenovirus receptor-like membrane protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024769.2NP_079045.1  CXADR-like membrane protein precursor

    See proteins identical to NP_079045.1

    Status: VALIDATED

    Source sequence(s)
    BC009371, BE272517, BG723094, BK001245, CA395814
    Consensus CDS
    CCDS8441.1
    UniProtKB/Swiss-Prot
    Q9H6B4
    Conserved Domains (3) summary
    cd00096
    Location:149222
    Ig; Immunoglobulin domain
    smart00410
    Location:144225
    IG_like; Immunoglobulin like
    cl11960
    Location:19115
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000011.10 

    Range
    123072312..123195299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate HuRef

Genomic

  1. AC_000143.1 

    Range
    118884692..119007600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018922.2 

    Range
    122829032..122951924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)