Display Settings:

Format

Send to:

Choose Destination

PPR1 Ppr1p [ Saccharomyces cerevisiae S288c ]

Gene ID: 850701, updated on 22-Aug-2014
Gene symbol
PPR1
Gene description
Ppr1p
Primary source
SGD:S000004004
Locus tag
YLR014C
Gene type
protein coding
RNA name
Ppr1p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See PPR1 in MapViewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (172268..174982, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Gat3p Neighboring gene Bre2p Neighboring gene Pml1p

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
sequence-specific DNA binding RNA polymerase II transcription factor activity IDA
Inferred from Direct Assay
more info
PubMed 
sequence-specific DNA binding RNA polymerase II transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IDA
Inferred from Direct Assay
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
positive regulation of pyrimidine nucleotide biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 
positive regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
pyrimidine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IC
Inferred by Curator
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Ppr1p
NP_013114.1
  • Zinc finger transcription factor; contains a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of URA1, URA3, URA4, and URA10, which are involved in de novo pyrimidine biosynthesis, in response to pyrimidine starvation; activity may be modulated by interaction with Tup1p

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 

    Range
    172268..174982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181901.1NP_013114.1  Ppr1p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_013114.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P07272
    Conserved Domains (2) summary
    cd12148
    Location:278744
    Blast Score: 416
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    cd00067
    Location:2962
    Blast Score: 152
    GAL4; GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain; found in transcription regulators like GAL4. Domain consists of two helices organized around a Zn(2)Cys(6 )motif; Binds to sequences containing 2 DNA half sites comprised of 3-5 C/G combinations