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    aff-1 AFF-1 [ Caenorhabditis elegans ]

    Gene ID: 174123, updated on 27-Jun-2015
    Gene symbol
    aff-1
    Gene description
    AFF-1
    Locus tag
    CELE_C44B7.3
    Gene type
    protein coding
    RNA name
    AFF-1
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    See aff-1 in MapViewer
    Location:
    chromosome: II
    Exon count:
    12
    Sequence:
    Chromosome: II; NC_003280.10 (6860789..6863752, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene C04A2.15 Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene DNJ-5 Neighboring gene ncRNA Neighboring gene ncRNA

    Names
    AFF-1
    NP_495402.3
    • Confirmed by transcript evidence;
      C. elegans AFF-1 protein; contains similarity to Pfam domain PF14884 Type I membrane glycoproteins cell-cell fusogen contains similarity to Interpro domain IPR029213 (Cell-cell fusogen EFF/AFF)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6860789..6863752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063001.5NP_495402.3  AFF-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495402.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EGL9
      Conserved Domains (1) summary
      pfam14884
      Location:1565
      EFF-AFF; Type I membrane glycoproteins cell-cell fusogen