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Map2 microtubule-associated protein 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 25595, updated on 13-Jul-2014
Official Symbol
Map2provided by RGD
Official Full Name
microtubule-associated protein 2provided by RGD
Primary source
RGD:3044
See related
Ensembl:ENSRNOG00000011841
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Also known as
MAP2R; Mtap2
Summary
regulates and organizes microtubules; may serve as a scaffolding protein for neuromodulatory activities [RGD, Feb 2006]
See Map2 in MapViewer
Location:
9q32
Exon count :
22
Annotation release Status Assembly Chr Location
104 current Rnor_5.0 (GCF_000001895.4) 9 NC_005108.3 (73837509..74095431, complement)

Chromosome 9 - NC_005108.3Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 1-like Neighboring gene similar to CG18437-PA Neighboring gene ribulose-5-phosphate-3-epimerase Neighboring gene splicing factor, arginine/serine-rich 12-like Neighboring gene crystallin, gamma F

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
dystroglycan binding IEA
Inferred from Electronic Annotation
more info
 
dystroglycan binding ISO
Inferred from Sequence Orthology
more info
 
microtubule binding IEA
Inferred from Electronic Annotation
more info
 
microtubule binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
axonogenesis IEA
Inferred from Electronic Annotation
more info
 
axonogenesis ISO
Inferred from Sequence Orthology
more info
 
cellular response to organic substance IEA
Inferred from Electronic Annotation
more info
 
cellular response to organic substance ISO
Inferred from Sequence Orthology
more info
 
central nervous system neuron development IEA
Inferred from Electronic Annotation
more info
 
central nervous system neuron development ISO
Inferred from Sequence Orthology
more info
 
dendrite development ISO
Inferred from Sequence Orthology
more info
 
dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 
dendrite morphogenesis ISO
Inferred from Sequence Orthology
more info
 
microtubule bundle formation IEA
Inferred from Electronic Annotation
more info
 
microtubule bundle formation ISO
Inferred from Sequence Orthology
more info
 
neuron projection development ISO
Inferred from Sequence Orthology
more info
 
peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 
response to estradiol IEP
Inferred from Expression Pattern
more info
 
response to progesterone IEP
Inferred from Expression Pattern
more info
 
Component Evidence Code Pubs
cell body ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
dendrite IDA
Inferred from Direct Assay
more info
PubMed 
dendrite ISO
Inferred from Sequence Orthology
more info
 
dendritic shaft IEA
Inferred from Electronic Annotation
more info
 
dendritic shaft ISO
Inferred from Sequence Orthology
more info
 
intracellular ISO
Inferred from Sequence Orthology
more info
 
microtubule IEA
Inferred from Electronic Annotation
more info
 
neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
neuron projection ISO
Inferred from Sequence Orthology
more info
 
neuronal cell body IDA
Inferred from Direct Assay
more info
 
neuronal cell body IEA
Inferred from Electronic Annotation
more info
 
neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
nuclear periphery IEA
Inferred from Electronic Annotation
more info
 
nuclear periphery ISO
Inferred from Sequence Orthology
more info
 
protein complex IDA
Inferred from Direct Assay
more info
PubMed 
rough endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
smooth endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
microtubule-associated protein 2
Names
microtubule-associated protein 2
MAP-2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013066.1NP_037198.1  microtubule-associated protein 2

    See proteins identical to NP_037198.1

    Status: PROVISIONAL

    Source sequence(s)
    X54100
    UniProtKB/TrEMBL
    Q64715
    Conserved Domains (2) summary
    pfam00418
    Location:16901720
    Blast Score: 156
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:3741507
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_5.0 Primary Assembly

Genomic

  1. NC_005108.3 

    Range
    73837509..74095431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006245088.1XP_006245150.1  

    See proteins identical to XP_006245150.1

    Conserved Domains (2) summary
    pfam00418
    Location:17761806
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4601593
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain
  2. XM_006245089.1XP_006245151.1  

    See proteins identical to XP_006245151.1

    Conserved Domains (2) summary
    pfam00418
    Location:17761806
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4601593
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain
  3. XM_006245093.1XP_006245155.1  

    Conserved Domains (2) summary
    pfam00418
    Location:17751805
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4591592
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain
  4. XM_006245091.1XP_006245153.1  

    Conserved Domains (2) summary
    pfam00418
    Location:17751805
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4591592
    Blast Score: 5489
    MAP2_projctn; MAP2/Tau projection domain
  5. XM_006245094.1XP_006245156.1  

    Conserved Domains (2) summary
    pfam00418
    Location:17721802
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4561589
    Blast Score: 5483
    MAP2_projctn; MAP2/Tau projection domain
  6. XM_006245092.1XP_006245154.1  

    Conserved Domains (2) summary
    pfam00418
    Location:17751805
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4601592
    Blast Score: 5468
    MAP2_projctn; MAP2/Tau projection domain
  7. XM_006245087.1XP_006245149.1  

    See proteins identical to XP_006245149.1

    Conserved Domains (2) summary
    pfam00418
    Location:17761806
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4601593
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain
  8. XM_006245099.1XP_006245161.1  

    See proteins identical to XP_006245161.1

    Conserved Domains (2) summary
    pfam00418
    Location:16901720
    Blast Score: 156
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:3741507
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain
  9. XM_006245097.1XP_006245159.1  

    Conserved Domains (2) summary
    pfam00418
    Location:16901720
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:3741507
    Blast Score: 5513
    MAP2_projctn; MAP2/Tau projection domain
  10. XM_006245098.1XP_006245160.1  

    UniProtKB/TrEMBL
    F1MAQ5
    Related
    ENSRNOP00000042029, ENSRNOT00000043627
    Conserved Domains (2) summary
    pfam00418
    Location:16941724
    Blast Score: 156
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:3781511
    Blast Score: 5485
    MAP2_projctn; MAP2/Tau projection domain
  11. XM_006245096.1XP_006245158.1  

    UniProtKB/TrEMBL
    F1LNK0
    Related
    ENSRNOP00000050877, ENSRNOT00000045766
    Conserved Domains (2) summary
    pfam00418
    Location:16941724
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:3781511
    Blast Score: 5514
    MAP2_projctn; MAP2/Tau projection domain
  12. XM_006245095.1XP_006245157.1  

    Conserved Domains (2) summary
    pfam00418
    Location:17761806
    Blast Score: 156
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4601593
    Blast Score: 5464
    MAP2_projctn; MAP2/Tau projection domain
  13. XM_006245101.1XP_006245163.1  

    See proteins identical to XP_006245163.1

    UniProtKB/TrEMBL
    Q78DZ1
    Conserved Domains (1) summary
    pfam00418
    Location:332362
    Blast Score: 145
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
  14. XM_006245103.1XP_006245165.1  

    Conserved Domains (1) summary
    pfam00418
    Location:331361
    Blast Score: 147
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
  15. XM_006245102.1XP_006245164.1  

    See proteins identical to XP_006245164.1

    UniProtKB/Swiss-Prot
    P15146
    Conserved Domains (1) summary
    pfam00418
    Location:332362
    Blast Score: 147
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
  16. XM_006245090.1XP_006245152.1  

    See proteins identical to XP_006245152.1

    Conserved Domains (2) summary
    pfam00418
    Location:17761806
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:4601593
    Blast Score: 5484
    MAP2_projctn; MAP2/Tau projection domain
  17. XM_006245100.1XP_006245162.1  

    Conserved Domains (2) summary
    pfam00418
    Location:16171647
    Blast Score: 155
    Tubulin-binding; Tau and MAP protein, tubulin-binding repeat
    pfam08377
    Location:3011434
    Blast Score: 5507
    MAP2_projctn; MAP2/Tau projection domain

Alternate Rn_Celera

Genomic

  1. AC_000077.1 

    Range
    65377941..65459391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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