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Figla folliculogenesis specific basic helix-loop-helix [ Mus musculus (house mouse) ]

Gene ID: 26910, updated on 4-May-2015
Official Symbol
Figlaprovided by MGI
Official Full Name
folliculogenesis specific basic helix-loop-helixprovided by MGI
Primary source
MGI:MGI:1349421
See related
Ensembl:ENSMUSG00000030001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
bHLHc8
Orthologs
See Figla in MapViewer
Location:
6; 6 C3
Exon count:
6
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 6 NC_000072.6 (86010320..86020996)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (85967185..85970990)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) Neighboring gene RIKEN cDNA 4930553P18 gene Neighboring gene predicted gene, 33319 Neighboring gene adducin 2 (beta) Neighboring gene protein aurora borealis-like

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
multicellular organismal development IEA
Inferred from Electronic Annotation
more info
 
oogenesis IEA
Inferred from Electronic Annotation
more info
 
positive regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 
transcription factor complex ISO
Inferred from Sequence Orthology
more info
 
transcription factor complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Preferred Names
factor in the germline alpha
Names
factor in the germline alpha
FIG alpha
FIGalpha
transcription factor FIGa

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012013.1NP_036143.1  factor in the germline alpha

    See identical proteins and their annotated locations for NP_036143.1

    Status: PROVISIONAL

    Source sequence(s)
    U91840
    Consensus CDS
    CCDS20307.1
    UniProtKB/TrEMBL
    H6UWL1
    UniProtKB/Swiss-Prot
    O55208
    Related
    ENSMUSP00000032070, ENSMUST00000032070
    Conserved Domains (1) summary
    cd00083
    Location:59116
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p3 C57BL/6J

    Range
    86010320..86020996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506186.2XP_006506249.1  

    Conserved Domains (1) summary
    cd00083
    Location:84141
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

Alternate Mm_Celera

Genomic

  1. AC_000028.1 Alternate Mm_Celera

    Range
    87951510..87955321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)