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APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100397628, updated on 26-Aug-2014
Gene symbol
APOBEC3G
Gene description
apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
See related
Ensembl:ENSCJAG00000004479
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix
Annotation information
Annotation category: partial on reference assembly
See APOBEC3G in MapViewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
Build 1.2 current Callithrix jacchus-3.2 (GCF_000004665.1) 1 Unlocalized Scaffold NW_003185206.1 (1360..12886)

NW_003185206.1Genomic Context describing neighboring genes

Genomic Sequence:
NW_003185206 chromosome 1 unlocalized scaffold reference Callithrix jacchus-3.2

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Preferred Names
DNA dC->dU-editing enzyme APOBEC-3G
Names
DNA dC->dU-editing enzyme APOBEC-3G
cytidine deaminase

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001267742.1NP_001254671.1  DNA dC->dU-editing enzyme APOBEC-3G

    See proteins identical to NP_001254671.1

    Status: PROVISIONAL

    Source sequence(s)
    FJ638413
    UniProtKB/TrEMBL
    C0KTR7
    Conserved Domains (3) summary
    pfam05240
    Location:318372
    Blast Score: 238
    APOBEC_C; APOBEC-like C-terminal domain
    cd01283
    Location:9138
    Blast Score: 144
    cytidine_deaminase; Cytidine deaminase zinc-binding domain. These enzymes are Zn dependent. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on ...
    pfam08210
    Location:202380
    Blast Score: 298
    APOBEC_N; APOBEC-like N-terminal domain

RefSeqs of Annotated Genomes: Build 1.2

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Callithrix jacchus-3.2

Genomic

  1. NW_003185206.1 

    Range
    1360..12886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002763491.1XP_002763537.1  

    Related
    ENSCJAP00000008103, ENSCJAT00000008568