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ATG11 Atg11p [ Saccharomyces cerevisiae S288c ]

Gene ID: 856162, updated on 6-Jul-2014
Gene symbol
ATG11
Gene description
Atg11p
Primary source
SGD:S000006253
Locus tag
YPR049C
Gene type
protein coding
RNA name
Atg11p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
CVT9
See ATG11 in MapViewer
Location:
chromosome: XVI
Exon count :
1
Sequence:
Chromosome: XVI; NC_001148.4 (661137..664673, complement)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene phenylalanine--tRNA ligase Neighboring gene Tah18p Neighboring gene Mak3p Neighboring gene Nhp6ap

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
protein complex scaffold IGI
Inferred from Genetic Interaction
more info
PubMed 
Process Evidence Code Pubs
CVT pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
CVT pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
autophagy IEA
Inferred from Electronic Annotation
more info
 
mitochondrion degradation IMP
Inferred from Mutant Phenotype
more info
PubMed 
peroxisome degradation IMP
Inferred from Mutant Phenotype
more info
PubMed 
piecemeal microautophagy of nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein localization to pre-autophagosomal structure IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein transport IEA
Inferred from Electronic Annotation
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extrinsic component of membrane IDA
Inferred from Direct Assay
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
pre-autophagosomal structure IDA
Inferred from Direct Assay
more info
PubMed 
pre-autophagosomal structure membrane IEA
Inferred from Electronic Annotation
more info
 
vacuolar membrane IEA
Inferred from Electronic Annotation
more info
 
vacuole IEA
Inferred from Electronic Annotation
more info
 
Names
Atg11p
NP_015374.1
  • Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the (PAS)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 

    Range
    661137..664673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184146.1NP_015374.1  Atg11p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_015374.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q12527
    Conserved Domains (3) summary
    pfam07195
    Location:224409
    Blast Score: 88
    FliD_C; Flagellar hook-associated protein 2 C-terminus
    pfam10377
    Location:9911173
    Blast Score: 388
    ATG11; Autophagy-related protein 11
    pfam12325
    Location:727837
    Blast Score: 85
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding

Supplemental Content

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