Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    EDN1 endothelin 1 [ Sus scrofa (pig) ]

    Gene ID: 396915, updated on 29-May-2016
    Gene symbol
    EDN1
    Gene description
    endothelin 1
    See related
    Ensembl:ENSSSCG00000001050 Vega:OTTSUSG00000001589
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Also known as
    EDN; ET1; ET-1; PPET1
    Orthologs
    Location:
    7; 7p1.3-p1.2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    105 current Sscrofa10.2 (GCF_000003025.5) 7 NC_010449.4 (9120519..9159252)

    Chromosome 7 - NC_010449.4Genomic Context describing neighboring genes Neighboring gene human immunodeficiency virus type I enhancer binding protein 1 Neighboring gene uncharacterized LOC106507341 Neighboring gene uncharacterized LOC102166420 Neighboring gene uncharacterized LOC102166499 Neighboring gene uncharacterized LOC102166612

    Genomic Sequence:
    NC_010449.4 Chromosome 7 Reference Sscrofa10.2 Primary Assembly

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Gene Ontology Provided by GO

    Process Evidence Code Pubs
    regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    endothelin-1
    Names
    preproendothelin-1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213882.1NP_999047.1  endothelin-1 preproprotein

      See identical proteins and their annotated locations for NP_999047.1

      Status: PROVISIONAL

      Source sequence(s)
      X07383
      UniProtKB/Swiss-Prot
      P09558
      Related
      ENSSSCP00000001121, OTTSUSP00000002168, ENSSSCT00000001144, OTTSUST00000003291
      Conserved Domains (2) summary
      pfam00322
      Location:4878
      Endothelin; Endothelin family
      smart00272
      Location:109129
      END; Endothelin

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 105 details...

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa10.2 Primary Assembly

    Genomic

    1. NC_010449.4 Reference Sscrofa10.2 Primary Assembly

      Range
      9120519..9159252
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013987639.1XP_013843093.1  

      UniProtKB/TrEMBL
      F1RV83
      Conserved Domains (2) summary
      pfam00322
      Location:4878
      Endothelin; Endothelin family
      smart00272
      Location:109129
      END; Endothelin
    2. XM_013987638.1XP_013843092.1  

      Conserved Domains (2) summary
      pfam00322
      Location:6696
      Endothelin; Endothelin family
      smart00272
      Location:127147
      END; Endothelin