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Muc16 mucin 16 [ Mus musculus (house mouse) ]

Gene ID: 73732, updated on 30-Jun-2014
Official Symbol
Muc16provided by MGI
Official Full Name
mucin 16provided by MGI
Primary source
MGI:1920982
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ca125; Gm1480; 1110008I14Rik
See Muc16 in Epigenomics, MapViewer
Location:
9 A2; 9
Exon count :
88
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 9 NC_000075.6 (18495445..18674821, complement)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene zinc finger protein 558 Neighboring gene methyl-CpG binding domain protein 3-like 1 Neighboring gene retrotransposon gag domain containing 1 pseudogene Neighboring gene olfactory receptor 24 Neighboring gene olfactory receptor 828

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
extracellular space ISO
Inferred from Sequence Orthology
more info
 

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000075.6 

    Range
    18495445..18674821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006510724.1XP_006510787.1  

    See proteins identical to XP_006510787.1

    Conserved Domains (3) summary
    pfam01390
    Location:86858792
    Blast Score: 187
    SEA; SEA domain
    pfam05109
    Location:43244761
    Blast Score: 121
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl02507
    Location:80738174
    Blast Score: 98
    SEA; SEA domain

Alternate Mm_Celera

Genomic

  1. AC_000031.1 

    Range
    15778989..15958935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006544413.1XP_006544476.1  

    See proteins identical to XP_006544476.1

    Conserved Domains (3) summary
    pfam01390
    Location:86858792
    Blast Score: 187
    SEA; SEA domain
    pfam05109
    Location:43244761
    Blast Score: 121
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl02507
    Location:80738174
    Blast Score: 98
    SEA; SEA domain

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