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Cd207 CD207 antigen [ Mus musculus (house mouse) ]

Gene ID: 246278, updated on 11-Sep-2014
Official Symbol
Cd207provided by MGI
Official Full Name
CD207 antigenprovided by MGI
Primary source
MGI:2180021
See related
Ensembl:ENSMUSG00000034783
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
See Cd207 in Epigenomics, MapViewer
Location:
6; 6 D1-D2
Exon count:
6
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 6 NC_000072.6 (83671207..83677857, complement)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L5 pseudogene Neighboring gene C-type lectin domain family 4, member f Neighboring gene ventral anterior homeobox 2, opposite strand Neighboring gene uncharacterized LOC102635663 Neighboring gene ventral anterior homeobox 2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
carbohydrate binding IDA
Inferred from Direct Assay
more info
PubMed 
carbohydrate binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
defense response to virus ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
C-type lectin domain family 4 member K
Names
C-type lectin domain family 4 member K
langerin
Langerhans cell specific c-type lectin

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_144943.3NP_659192.2  C-type lectin domain family 4 member K

    See proteins identical to NP_659192.2

    Status: VALIDATED

    Source sequence(s)
    AC090647, AK142731
    Consensus CDS
    CCDS39534.1
    UniProtKB/Swiss-Prot
    Q8VBX4
    Related
    ENSMUSP00000040746, ENSMUST00000037882
    Conserved Domains (1) summary
    cd03590
    Location:201324
    Blast Score: 391
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000072.6 

    Range
    83671207..83677857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506139.1XP_006506202.1  

    Conserved Domains (1) summary
    cd03590
    Location:201323
    Blast Score: 379
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

Alternate Mm_Celera

Genomic

  1. AC_000028.1 

    Range
    85653930..85660605
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)