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    CAP1 cyclase associated protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829600, updated on 2-Apr-2015
    Gene symbol
    CAP1
    Gene description
    cyclase associated protein 1
    Primary source
    TAIR:AT4G34490
    Locus tag
    AT4G34490
    Gene type
    protein coding
    RNA name
    cyclase associated protein 1
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCAP1; CAP 1; CAP1; cyclase associated protein 1; T4L20.70; T4L20_70
    Summary
    CYCLASE ASSOCIATED PROTEIN
    See CAP1 in MapViewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (16484530..16487417, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glucan endo-1,3-beta-glucosidase 7 Neighboring gene SKP1-like protein 12 Neighboring gene probable receptor-like serine/threonine-protein kinase Neighboring gene 3-ketoacyl-CoA synthase 17

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Homology

    • Homologs of the CAP1 gene: The CAP1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, S.pombe, M.oryzae, N.crassa, rice, and frog.
    NM_119614.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    actin binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    actin cytoskeleton organization TAS
    Traceable Author Statement
    more info
    PubMed 
    anthocyanin accumulation in tissues in response to UV light RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    cell tip growth RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    cell wall organization RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    glucose catabolic process RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    multidimensional cell growth RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    polysaccharide biosynthetic process RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    regulation of hormone levels RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    root hair elongation RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    unidimensional cell growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane ISM
    Inferred from Sequence Model
    more info
     
    Names
    cyclase associated protein 1
    NP_195175.1
    • cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16484530..16487417 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119614.5NP_195175.1  cyclase associated protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195175.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65902
      Conserved Domains (3) summary
      smart00673
      Location:354391
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam01213
      Location:3309
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:316474
      CAP_C; Adenylate cyclase associated (CAP) C terminal