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    ATG27 Atg27p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 853261, updated on 13-Aug-2016
    Gene symbol
    ATG27
    Gene description
    Atg27p
    Primary source
    SGD:S000003714
    Locus tag
    YJL178C
    Gene type
    protein coding
    RNA name
    Atg27p
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    ETF1
    See ATG27 in Map Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_001142.9 (89282..90097, complement)

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene ATP synthase complex assembly protein ATP12 Neighboring gene prefolding complex chaperone subunit Neighboring gene ribosomal 60S subunit protein L17B Neighboring gene Swi3p

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    phosphatidylinositol-3-phosphate binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    CVT pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    autophagosome assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    autophagy IEA
    Inferred from Electronic Annotation
    more info
     
    pexophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein localization to pre-autophagosomal structure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    vesicle organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasmic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
     
    fungal-type vacuole IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    mitochondrial membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    pre-autophagosomal structure IDA
    Inferred from Direct Assay
    more info
    PubMed 
    pre-autophagosomal structure membrane IEA
    Inferred from Electronic Annotation
    more info
     
    trans-Golgi network IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Names
    Atg27p
    NP_012357.2
    • Type I membrane protein involved in autophagy and the Cvt pathway; may be involved in membrane delivery to the phagophore assembly site

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9 Reference assembly

      Range
      89282..90097 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181611.1NP_012357.2  Atg27p [Saccharomyces cerevisiae S288c]

      See identical proteins and their annotated locations for NP_012357.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46989
      Conserved Domains (1) summary
      pfam09451
      Location:7266
      ATG27; Autophagy-related protein 27