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    Tax1bp1 Tax1 (human T cell leukemia virus type I) binding protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 52440, updated on 27-Jun-2015
    Official Symbol
    Tax1bp1provided by MGI
    Official Full Name
    Tax1 (human T cell leukemia virus type I) binding protein 1provided by MGI
    Primary source
    MGI:MGI:1289308
    See related
    Ensembl:ENSMUSG00000004535; Vega:OTTMUSG00000022785
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    T6bp; TXBP151; AA930106; D6Ertd404e; D6Ertd772e; 1200003J11Rik; 1700069J21Rik
    Orthologs
    See Tax1bp1 in Epigenomics, MapViewer
    Location:
    6 B3; 6 25.7 cM
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 6 NC_000072.6 (52713575..52766780)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (52663723..52716774)

    Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700094M24 gene Neighboring gene 3-hydroxyisobutyrate dehydrogenase Neighboring gene predicted gene, 33047 Neighboring gene JAZF zinc finger 1 Neighboring gene predicted gene 15572 Neighboring gene predicted gene, 38813

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    ubiquitin binding NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of NF-kappaB transcription factor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    tax1-binding protein 1 homolog
    Names
    tax1-binding protein 1 homolog
    TRAF6-binding protein homolog
    Tax1 (human T-cell leukemia virus type I) binding protein 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025816.3NP_080092.2  tax1-binding protein 1 homolog

      See identical proteins and their annotated locations for NP_080092.2

      Status: VALIDATED

      Source sequence(s)
      AC099741, AK146076, BP754065
      Consensus CDS
      CCDS39490.1
      UniProtKB/Swiss-Prot
      Q3UKC1
      Related
      ENSMUSP00000079548, OTTMUSP00000026144, ENSMUST00000080723, OTTMUST00000054717
      Conserved Domains (3) summary
      COG4372
      Location:338694
      COG4372; Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]
      pfam09304
      Location:177278
      Cortex-I_coil; Cortexillin I, coiled coil
      pfam13870
      Location:248443
      DUF4201; Domain of unknown function (DUF4201)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000072.6 Reference GRCm38.p3 C57BL/6J

      Range
      52713575..52766780
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006506370.2XP_006506433.1  

      Conserved Domains (2) summary
      pfam07888
      Location:17407
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam09304
      Location:177278
      Cortex-I_coil; Cortexillin I, coiled coil
    2. XM_006506371.2XP_006506434.1  

      Conserved Domains (3) summary
      pfam07888
      Location:17406
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam09304
      Location:177278
      Cortex-I_coil; Cortexillin I, coiled coil
      cl19113
      Location:211351
      ApoLp-III_like; Apolipophorin-III and similar insect proteins
    3. XM_006506369.2XP_006506432.1  

      See identical proteins and their annotated locations for XP_006506432.1

      UniProtKB/Swiss-Prot
      Q3UKC1
      Conserved Domains (3) summary
      COG4372
      Location:338694
      COG4372; Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]
      pfam09304
      Location:177278
      Cortex-I_coil; Cortexillin I, coiled coil
      pfam13870
      Location:248443
      DUF4201; Domain of unknown function (DUF4201)

    Alternate Mm_Celera

    Genomic

    1. AC_000028.1 Alternate Mm_Celera

      Range
      53238010..53291146
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)