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GSM1 Gsm1p [ Saccharomyces cerevisiae S288c ]

Gene ID: 853341, updated on 6-Jul-2014
Gene symbol
GSM1
Gene description
Gsm1p
Primary source
SGD:S000003639
Locus tag
YJL103C
Gene type
protein coding
RNA name
Gsm1p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See GSM1 in MapViewer
Location:
chromosome: X
Exon count :
1
Sequence:
Chromosome: X; NC_001142.9 (229025..230881, complement)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Pam16p Neighboring gene ncRNA Neighboring gene Mef2p Neighboring gene tRNA

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
sequence-specific DNA binding RNA polymerase II transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding transcription factor activity IDA
Inferred from Direct Assay
more info
PubMed 
sequence-specific DNA binding transcription factor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
oxidative phosphorylation IEP
Inferred from Expression Pattern
more info
PubMed 
oxidative phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
regulation of transcription from RNA polymerase II promoter IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
sporulation resulting in formation of a cellular spore IEA
Inferred from Electronic Annotation
more info
 
transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IC
Inferred by Curator
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Gsm1p
NP_012432.1
  • Putative zinc cluster hypothetical protein; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001142.9 

    Range
    229025..230881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181536.1NP_012432.1  Gsm1p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_012432.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P42950
    Conserved Domains (1) summary
    cd00067
    Location:1644
    Blast Score: 103
    GAL4; GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain; found in transcription regulators like GAL4. Domain consists of two helices organized around a Zn(2)Cys(6 )motif; Binds to sequences containing 2 DNA half sites comprised of 3-5 C/G combinations

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