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    PRAP1 proline-rich acidic protein 1 [ Homo sapiens (human) ]

    Gene ID: 118471, updated on 5-Jul-2015
    Official Symbol
    PRAP1provided by HGNC
    Official Full Name
    proline-rich acidic protein 1provided by HGNC
    Primary source
    HGNC:HGNC:23304
    See related
    Ensembl:ENSG00000165828; HPRD:17898; MIM:609776; Vega:OTTHUMG00000019312
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    UPA; PRO1195
    Orthologs
    See PRAP1 in Epigenomics, MapViewer
    Location:
    10q26.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    107 current GRCh38.p2 (GCF_000001405.28) 10 NC_000010.11 (133347340..133352683)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (135148362..135166187)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene calcyon neuron-specific vesicular protein Neighboring gene barrier to autointegration factor 1 pseudogene 2 Neighboring gene fucose mutarotase Neighboring gene enoyl CoA hydratase, short chain, 1, mitochondrial Neighboring gene microRNA 3944

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Readthrough ZNF511-PRAP1

    Readthrough gene: ZNF511-PRAP1, Included gene: ZNF511

    Homology

    Clone Names

    • MGC126792

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    proline-rich acidic protein 1
    Names
    epididymis tissue protein Li 178

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001145201.1NP_001138673.1  proline-rich acidic protein 1 isoform 2 precursor

      See identical proteins and their annotated locations for NP_001138673.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The resulting isoform (2) is shorter but has the same N- and C-termini compared to isoform 1.
      Source sequence(s)
      AL360181, BC071872, DQ884405
      Consensus CDS
      CCDS44498.1
      UniProtKB/TrEMBL
      A6XND8
      UniProtKB/Swiss-Prot
      Q96NZ9
      Conserved Domains (1) summary
      pfam15314
      Location:96140
      PRAP; Proline-rich acidic protein 1, pregnancy-specific uterine
    2. NM_145202.4NP_660203.3  proline-rich acidic protein 1 isoform 1 precursor

      See identical proteins and their annotated locations for NP_660203.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AL360181, BC071872
      Consensus CDS
      CCDS7679.1
      UniProtKB/Swiss-Prot
      Q96NZ9
      Related
      ENSP00000416126, OTTHUMP00000020800, ENST00000433452, OTTHUMT00000051132
      Conserved Domains (1) summary
      pfam15314
      Location:105149
      PRAP; Proline-rich acidic protein 1, pregnancy-specific uterine

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p2 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p2 Primary Assembly

      Range
      133347340..133352683
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.1

    Genomic

    1. NC_018921.2 Alternate CHM1_1.1

      Range
      135442819..135448127
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)