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Cetn3 centrin, EF-hand protein, 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 170895, updated on 27-Sep-2014
Official Symbol
Cetn3provided by RGD
Official Full Name
centrin, EF-hand protein, 3provided by RGD
Primary source
RGD:620249
See related
Ensembl:ENSRNOG00000048563
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Summary
human homolog may be involved in regulation of role in spindle pole body duplication during the cell cycle [RGD, Feb 2006]
See Cetn3 in MapViewer
Location:
2q11
Exon count:
6
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (12101486..12115009)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 2 NC_005101.3 (11965387..11977798)

Chromosome 2 - NC_005101.4Genomic Context describing neighboring genes Neighboring gene myocyte enhancer factor 2C Neighboring gene uncharacterized LOC103691412 Neighboring gene microRNA mir-3597-2 Neighboring gene microRNA mir-9-2 Neighboring gene DNA-directed RNA polymerase III subunit RPC7-like Neighboring gene stathmin-like

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
G-protein beta/gamma-subunit complex binding ISO
Inferred from Sequence Orthology
more info
 
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
microtubule binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
centriole ISO
Inferred from Sequence Orthology
more info
 
centrosome ISO
Inferred from Sequence Orthology
more info
 
ciliary basal body ISO
Inferred from Sequence Orthology
more info
 
ciliary transition zone ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
intermediate filament cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
photoreceptor connecting cilium ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
centrin-3
Names
centrin-3
centrin 3
centrin, EF-hand protein, 3 (CDC31 homolog, yeast)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191842.1NP_001178771.1  centrin-3

    See proteins identical to NP_001178771.1

    Status: PROVISIONAL

    Source sequence(s)
    AABR07007389
    UniProtKB/TrEMBL
    G3V821
    Related
    ENSRNOP00000067453, ENSRNOT00000072155
    Conserved Domains (2) summary
    PTZ00183
    Location:15166
    PTZ00183; centrin; Provisional
    cd00051
    Location:102164
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005101.4 

    Range
    12101486..12115009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_590796.1 RNA Sequence