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    TEVgp1 polyprotein [ Tobacco etch virus ]

    Gene ID: 1502321, updated on 20-Aug-2016
    Gene symbol
    TEVgp1
    Gene description
    polyprotein
    Locus tag
    TEVgp1
    Gene type
    protein coding
    RNA name
    viral mRNA
    RefSeq status
    REVIEWED
    Organism
    Tobacco etch virus
    Lineage
    Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; Potyvirus
    Sequence:
    NC_001555.1 (1..9494)

    NC_001555.1Genomic Context describing neighboring genes Neighboring gene PIPO

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Names
    polyprotein
    6K2 protein
    NIa-VPg protein
    NIb protein
    coat protein
    P1 protein
    HC-Pro protein
    P3 protein
    6K1 protein
    CI protein
    NIa-Pro protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001555.1 Reference assembly

      Range
      1..9494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_062908.1 polyprotein [Tobacco etch virus]

      See identical proteins and their annotated locations for NP_062908.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P04517
      Conserved Domains (12) summary
      cl02808
      Location:23464
      RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
      pfam00767
      Location:30262
      Poty_coat; Potyvirus coat protein
      pfam01577
      Location:74303
      Peptidase_S30; Potyvirus P1 protease
      pfam00851
      Location:8459
      Peptidase_C6; Helper component proteinase
      pfam13608
      Location:11347
      Potyvirid-P3; Protein P3 of Potyviral polyprotein
      pfam13608
      Location:151
      Potyvirid-P3; Protein P3 of Potyviral polyprotein
      smart00487
      Location:78220
      DEXDc; DEAD-like helicases superfamily
      cd00046
      Location:78205
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      pfam00271
      Location:249359
      Helicase_C; Helicase conserved C-terminal domain
      pfam08440
      Location:384615
      Poty_PP; Potyviridae polyprotein
      pfam13608
      Location:150
      Potyvirid-P3; Protein P3 of Potyviral polyprotein
      pfam00863
      Location:1232
      Peptidase_C4; Peptidase family C4