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    rpsM 30S ribosomal protein S13 [ Thermus thermophilus HB8 ]

    Gene ID: 3167962, updated on 12-Feb-2024

    Summary

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    Gene symbol
    rpsM
    Gene description
    30S ribosomal protein S13
    Locus tag
    TTH_RS08435
    Gene type
    protein coding
    Organism
    Thermus thermophilus HB8 (strain: HB8, type-material: type strain of Thermus thermophilus)
    Lineage
    Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus
    Old locus tag
    TTHA1667
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_006461.1 (1578744..1579124, complement)

    Chromosome 1 - NC_006461.1Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S4 Neighboring gene 30S ribosomal protein S11 Neighboring gene 50S ribosomal protein L36 Neighboring gene translation initiation factor IF-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006461.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit. Dunham CM, et al. RNA, 2007 Jun. PMID 17416634, Free PMC Article
    2. Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation. Cukras AR, et al. J Mol Biol, 2005 May 27. PMID 15876367, Free PMC Article
    3. Ribosomal proteins S12 and S13 function as control elements for translocation of the mRNA:tRNA complex. Cukras AR, et al. Mol Cell, 2003 Aug. PMID 14536072
    4. Assembly of the 30S ribosomal subunit: positioning ribosomal protein S13 in the S7 assembly branch. Grondek JF, et al. RNA, 2004 Dec. PMID 15525707, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    30S ribosomal protein S13

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006461.1 Reference assembly

      Range
      1578744..1579124 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_008633368.1 MULTISPECIES: 30S ribosomal protein S13 [Thermus]

      See identical proteins and their annotated locations for WP_008633368.1

      UniProtKB/Swiss-Prot
      P62655, P80377, Q5SHR3, Q9RA65
      UniProtKB/TrEMBL
      A0A3P4AUB7, F6DEM7, H7GI58, H9ZPM7
      Conserved Domains (1) summary
      PRK05179
      Location:1 → 122
      rpsM; 30S ribosomal protein S13; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    2HHH_M.1
    2UU9_M.1
    2UUA_M.1
    2UUB_M.1
    2UUC_M.1
    2UXB_M.1
    2UXC_M.1
    2UXD_M.1
    2VQE_M.1
    2VQF_M.1
    3OTO_M.1
    3T1H_M.1
    3T1Y_M.1
    4B3M_M.1
    4B3R_M.1
    4B3S_M.1
    4B3T_M.1
    4CR1_M.1
    4DR1_M.1
    4DR2_M.1
    4DR3_M.1
    4DR4_M.1
    4DR5_M.1
    4DR6_M.1
    4DR7_M.1
    4DUY_M.1
    4DUZ_M.1
    4DV0_M.1
    4DV1_M.1
    4DV2_M.1
    4DV3_M.1
    4DV4_M.1
    4DV5_M.1
    4DV6_M.1
    4DV7_M.1
    4JI0_M.1
    4JI1_M.1
    4JI2_M.1
    4JI3_M.1
    4JI4_M.1
    4JI5_M.1
    4JI6_M.1
    4JI7_M.1
    4JI8_M.1
    4LF4_M.1
    4LF5_M.1
    4LF6_M.1
    4LF7_M.1
    4LF8_M.1
    4LF9_M.1
    4LFA_M.1
    4LFB_M.1
    4LFC_M.1
    4NXM_M.1
    4NXN_M.1
    4OX9_M.1
    4YY3_M.1
    5BR8_M.1
    5IMQ_Q.1
    5IMR_Q.1
    5LMN_M.1
    5LMO_M.1
    5LMP_M.1
    5LMQ_M.1
    5LMR_M.1
    5LMS_M.1
    5LMT_M.1
    5LMU_M.1
    5LMV_M.1
    5ZLU_R.1
    6DTI_M.1
    6MKN_M.1
    6MPI_M.1
    6NY6_M.1
    P80377.3

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