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Rps9 ribosomal protein S9 [ Mus musculus (house mouse) ]

Gene ID: 76846, updated on 19-Jul-2014
Official Symbol
Rps9provided by MGI
Official Full Name
ribosomal protein S9provided by MGI
Primary source
MGI:1924096
See related
Ensembl:ENSMUSG00000006333; Vega:OTTMUSG00000022990
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AL022771; AL022885; 3010033P07Rik
See Rps9 in Epigenomics, MapViewer
Location:
7 A1; 7
Exon count :
6
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 7 NC_000073.6 (3703953..3706897)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene leukocyte receptor cluster (LRC) member 1 Neighboring gene transmembrane channel-like gene family 4 Neighboring gene membrane bound O-acyltransferase domain containing 7 Neighboring gene tRNA splicing endonuclease 34 homolog (S. cerevisiae) Neighboring gene paired Ig-like receptor B Neighboring gene paired-Ig-like receptor A1

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
rRNA binding IEA
Inferred from Electronic Annotation
more info
 
structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
translation regulator activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
positive regulation of cell proliferation ISO
Inferred from Sequence Orthology
more info
 
regulation of translation ISO
Inferred from Sequence Orthology
more info
 
translation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
extracellular vesicular exosome ISO
Inferred from Sequence Orthology
more info
 
intracellular IEA
Inferred from Electronic Annotation
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
ribonucleoprotein complex ISO
Inferred from Sequence Orthology
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 
small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
40S ribosomal protein S9
Names
40S ribosomal protein S9

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029767.2NP_084043.1  40S ribosomal protein S9

    See proteins identical to NP_084043.1

    Status: PROVISIONAL

    Source sequence(s)
    AK050591
    Consensus CDS
    CCDS20726.1
    UniProtKB/Swiss-Prot
    Q6ZWN5
    Related
    ENSMUSP00000006496, OTTMUSP00000026495, ENSMUST00000006496, OTTMUST00000055345
    Conserved Domains (3) summary
    PTZ00155
    Location:11175
    Blast Score: 735
    PTZ00155; 40S ribosomal protein S9; Provisional
    pfam00163
    Location:6107
    Blast Score: 221
    Ribosomal_S4; Ribosomal protein S4/S9 N-terminal domain
    cd00165
    Location:108150
    Blast Score: 104
    S4; S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000073.6 

    Range
    3703953..3706897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540420.1XP_006540483.1  

    See proteins identical to XP_006540483.1

    UniProtKB/TrEMBL
    Q9CXW7
    Related
    ENSMUSP00000104263, OTTMUSP00000026496, ENSMUST00000108623, OTTMUST00000055346
    Conserved Domains (2) summary
    pfam00163
    Location:6107
    Blast Score: 232
    Ribosomal_S4; Ribosomal protein S4/S9 N-terminal domain
    pfam01479
    Location:108135
    Blast Score: 86
    S4; S4 domain

RNA

  1. XR_391108.1 RNA Sequence

Alternate Mm_Celera

Genomic

  1. AC_000029.1 

    Range
    3617631..3620489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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