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Pacrg PARK2 co-regulated [ Mus musculus (house mouse) ]

Gene ID: 69310, updated on 3-May-2015
Official Symbol
Pacrgprovided by MGI
Official Full Name
PARK2 co-regulatedprovided by MGI
Primary source
MGI:MGI:1916560
See related
Ensembl:ENSMUSG00000037196; Vega:OTTMUSG00000031249
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700008H23Rik
Orthologs
See Pacrg in MapViewer
Location:
17 7.8 cM; 17 A2
Exon count:
6
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 17 NC_000083.6 (10403012..10840191, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (10595878..11033057, complement)

Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A230009B12 gene Neighboring gene predicted gene, 35121 Neighboring gene predicted gene, 39565 Neighboring gene predicted gene 16168 Neighboring gene uncharacterized protein C3orf18 homolog pseudogene Neighboring gene predicted gene 16169 Neighboring gene Parkinson disease (autosomal recessive, juvenile) 2, parkin Neighboring gene predicted gene 28505

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
G-protein coupled receptor binding ISO
Inferred from Sequence Orthology
more info
 
Hsp70 protein binding ISO
Inferred from Sequence Orthology
more info
 
Hsp90 protein binding ISO
Inferred from Sequence Orthology
more info
 
actin binding ISO
Inferred from Sequence Orthology
more info
 
alpha-tubulin binding ISO
Inferred from Sequence Orthology
more info
 
beta-tubulin binding ISO
Inferred from Sequence Orthology
more info
 
chaperone binding ISO
Inferred from Sequence Orthology
more info
 
heat shock protein binding ISO
Inferred from Sequence Orthology
more info
 
ubiquitin protein ligase binding IPI
Inferred from Physical Interaction
more info
PubMed 
ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cellular response to unfolded protein TAS
Traceable Author Statement
more info
PubMed 
negative regulation of cell death IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of cell death ISO
Inferred from Sequence Orthology
more info
 
spermatid development IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
cell body IDA
Inferred from Direct Assay
more info
PubMed 
cilium IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
cytosol ISO
Inferred from Sequence Orthology
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
neuron projection ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
sperm midpiece IDA
Inferred from Direct Assay
more info
PubMed 
vesicle IDA
Inferred from Direct Assay
more info
PubMed 
vesicle ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
parkin coregulated gene protein homolog
Names
parkin coregulated gene protein homolog
PARK2 coregulated gene protein
hypertension-related protein 1-like protein
parkin co-regulated gene protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027032.2NP_081308.1  parkin coregulated gene protein homolog

    See identical proteins and their annotated locations for NP_081308.1

    Status: VALIDATED

    Source sequence(s)
    AK005771, AK135510
    Consensus CDS
    CCDS28388.1
    UniProtKB/TrEMBL
    Q0VB91
    UniProtKB/TrEMBL
    Q3UXK4
    UniProtKB/Swiss-Prot
    Q9DAK2
    Related
    ENSMUSP00000044376, OTTMUSP00000040936, ENSMUST00000041463, OTTMUST00000077414
    Conserved Domains (1) summary
    pfam10274
    Location:54237
    ParcG; Parkin co-regulated protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000083.6 Reference GRCm38.p3 C57BL/6J

    Range
    10403012..10840191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006523353.2XP_006523416.1  

    See identical proteins and their annotated locations for XP_006523416.1

    Conserved Domains (1) summary
    pfam10274
    Location:1135
    ParcG; Parkin co-regulated protein

Alternate Mm_Celera

Genomic

  1. AC_000039.1 Alternate Mm_Celera

    Range
    10441554..10880474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)