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xcpR type II secretion system protein E [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 877804, updated on 6-Oct-2023

Summary

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Gene symbol
xcpR
Gene description
type II secretion system protein E
Locus tag
PA3103
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (3481914..3483422, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene type II secretion system protein I Neighboring gene type II secretion system protein H Neighboring gene type II secretion system protein G Neighboring gene type II secretion system protein F Neighboring gene type II secretion system protein N Neighboring gene type II secretion system protein D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Polar secretion of proteins via the Xcp type II secretion system in Pseudomonas aeruginosa. Senf F, et al. Microbiology (Reading), 2008 Oct. PMID 18832308
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Assembly of the type II secretion system proteins XcpR and XcpS and protein secretion takes place at the cell poles.
    Title: Polar secretion of proteins via the Xcp type II secretion system in Pseudomonas aeruginosa.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within protein secretion by the type II secretion system IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of type II protein secretion system complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
type II secretion system protein E
NP_251793.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    3481914..3483422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_251793.1 type II secretion system protein E [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_251793.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2R3IYA4
    Conserved Domains (1) summary
    TIGR02533
    Location:21 → 499
    type_II_gspE; type II secretion system protein E
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q00512.1

Gene LinkOut

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Molecular Biology Databases