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    LOC107276748 E3 ubiquitin-protein ligase EL5 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 107276748, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC107276748
    Gene description
    E3 ubiquitin-protein ligase EL5
    Locus tag
    OSNPB_020561400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    EL5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (21286184..21287459, complement)

    Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase EL5 Neighboring gene monooxygenase 1 Neighboring gene monooxygenase 1 Neighboring gene E3 ubiquitin-protein ligase EL5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase EL5
    Names
    Os02g0561400
    P0435E12.32

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

      Range
      21286184..21287459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015768473.2 → XP_015623959.1  E3 ubiquitin-protein ligase EL5

      UniProtKB/Swiss-Prot
      Q0E0C5, Q9LRB7
      UniProtKB/TrEMBL
      A3A822
      Conserved Domains (1) summary
      cd16461
      Location:133 → 176
      RING-H2_EL5_like; RING finger, H2 subclass, found in rice E3 ubiquitin-protein ligase EL5 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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