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    LOC410982 protein croquemort [ Apis mellifera (honey bee) ]

    Gene ID: 410982, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC410982
    Gene description
    protein croquemort
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    SCR-B6; GB53014
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    Genomic context

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    Location:
    chromosome: LG4
    Exon count:
    11
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG4 NC_037641.1 (12993763..13004173, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG4 NC_007073.3 (12181410..12191839)

    Linkage Group LG4 - NC_037641.1Genomic Context describing neighboring genes Neighboring gene trichohyalin Neighboring gene protein FAM151B Neighboring gene protein borderless Neighboring gene protein turtle

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein croquemort
    Names
    scavenger receptor class B, type 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037641.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      12993763..13004173 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006569296.3 → XP_006569359.1  protein croquemort

      See identical proteins and their annotated locations for XP_006569359.1

      UniProtKB/TrEMBL
      A0A7M7GXL8, A0A7M7IHB0, A0A8B6Z6Q2, A0A8B7KJS1
      Conserved Domains (1) summary
      pfam01130
      Location:19 → 502
      CD36; CD36 family

    2. XM_016911771.2 → XP_016767260.1  protein croquemort

      UniProtKB/TrEMBL
      A0A7M7GXL8, A0A7M7IHB0, A0A8B6Z6Q2, A0A8B7KJS1
      Conserved Domains (1) summary
      pfam01130
      Location:19 → 502
      CD36; CD36 family

    3. XM_006569295.3 → XP_006569358.1  protein croquemort

      See identical proteins and their annotated locations for XP_006569358.1

      UniProtKB/TrEMBL
      A0A7M7GXL8, A0A7M7IHB0, A0A8B6Z6Q2, A0A8B7KJS1
      Conserved Domains (1) summary
      pfam01130
      Location:19 → 502
      CD36; CD36 family
    Nucleotide Protein Strain
    Heading Accession and Version

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