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    LOC551508 vang-like protein 1 [ Apis mellifera (honey bee) ]

    Gene ID: 551508, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC551508
    Gene description
    vang-like protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB50725
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    Genomic context

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    See LOC551508 in Genome Data Viewer
    Location:
    chromosome: LG2
    Exon count:
    4
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG2 NC_037639.1 (6937443..6939815, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG2 NC_007071.3 (5576356..5582811, complement)

    Linkage Group LG2 - NC_037639.1Genomic Context describing neighboring genes Neighboring gene polycomb protein EED Neighboring gene probable prefoldin subunit 2 Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 Neighboring gene putative tricarboxylate transport protein, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Wnt signaling pathway, planar cell polarity pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of planar polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vang-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037639.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      6937443..6939815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_623902.5 → XP_623905.1  vang-like protein 1

      UniProtKB/TrEMBL
      A0A7M7TFV2, A0A8B9B1K3
      Conserved Domains (1) summary
      pfam06638
      Location:29 → 572
      Strabismus; Strabismus protein
    Nucleotide Protein Strain
    Heading Accession and Version

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