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    LOC410595 protein RMD5 homolog A [ Apis mellifera (honey bee) ]

    Gene ID: 410595, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC410595
    Gene description
    protein RMD5 homolog A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB50231
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    Genomic context

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    Location:
    chromosome: LG15
    Exon count:
    7
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG15 NC_037652.1 (7762137..7764974)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG15 NC_007084.3 (8223360..8226792)

    Linkage Group LG15 - NC_037652.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100576432 Neighboring gene V-type proton ATPase subunit e 2 Neighboring gene synaptic vesicular amine transporter Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA alanine (anticodon CGC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein RMD5 homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037652.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      7762137..7764974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026445564.1 → XP_026301349.1  protein RMD5 homolog A

      UniProtKB/TrEMBL
      A0A7M7MUV5, A0A8B8HF35
      Conserved Domains (2) summary
      COG5109
      Location:26 → 392
      COG5109; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      pfam10607
      Location:153 → 298
      CLTH; CTLH/CRA C-terminal to LisH motif domain
    Nucleotide Protein Strain
    Heading Accession and Version

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