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    LOC408507 WD repeat-containing protein 44 [ Apis mellifera (honey bee) ]

    Gene ID: 408507, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC408507
    Gene description
    WD repeat-containing protein 44
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB49961
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    Genomic context

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    Location:
    chromosome: LG15
    Exon count:
    7
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG15 NC_037652.1 (8810704..8816879, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG15 NC_007084.3 (9288727..9294906, complement)

    Linkage Group LG15 - NC_037652.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC408508 Neighboring gene uncharacterized LOC410581 Neighboring gene uncharacterized LOC113219279 Neighboring gene synaptic functional regulator FMR1 Neighboring gene E3 ubiquitin-protein ligase RNF19A Neighboring gene uncharacterized LOC100379261

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 44
    Names
    rab11 binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037652.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      8810704..8816879 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_392050.7 → XP_392050.5  WD repeat-containing protein 44 isoform X2

      UniProtKB/TrEMBL
      A0A7M7R2U3, A0A8B9AY60
      Conserved Domains (3) summary
      cd00200
      Location:553 → 893
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:557 → 585
      7WD40; WD40 repeat [structural motif]
      cl25756
      Location:197 → 309
      BASP1; Brain acid soluble protein 1 (BASP1 protein)

    2. XM_006563658.3 → XP_006563721.2  WD repeat-containing protein 44 isoform X1

      UniProtKB/TrEMBL
      A0A7M7GRB4, A0A8B6Z266
      Conserved Domains (2) summary
      cd00200
      Location:594 → 934
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:598 → 626
      7WD40; WD40 repeat [structural motif]

    RNA

    1. XR_409746.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases