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    LOC413110 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [ Apis mellifera (honey bee) ]

    Gene ID: 413110, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC413110
    Gene description
    DNA-directed RNA polymerases I, II, and III subunit RPABC1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB43544
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    Genomic context

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    See LOC413110 in Genome Data Viewer
    Location:
    chromosome: LG14
    Exon count:
    2
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG14 NC_037651.1 (5172984..5174437, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG14 NC_007083.3 (4663865..4665306, complement)

    Linkage Group LG14 - NC_037651.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102656671 Neighboring gene protein enhancer of sevenless 2B Neighboring gene glutamate-gated chloride channel Neighboring gene microRNA mir-3786 Neighboring gene pentatricopeptide repeat-containing protein 2, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerases I, II, and III subunit RPABC1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037651.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      5172984..5174437 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_396561.4 → XP_396561.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1

      See identical proteins and their annotated locations for XP_396561.1

      UniProtKB/TrEMBL
      A0A7M7R8L4, A0A8B9AZD8
      Conserved Domains (1) summary
      PLN03111
      Location:1 → 210
      PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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