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    LOC100576797 acyl-CoA Delta(11) desaturase [ Apis mellifera (honey bee) ]

    Gene ID: 100576797, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100576797
    Gene description
    acyl-CoA Delta(11) desaturase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB42218
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    Genomic context

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    See LOC100576797 in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    7
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG4 NC_037641.1 (2042747..2051510)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG1 NC_007070.3 (21264989..21272834, complement)

    Linkage Group LG4 - NC_037641.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA Delta(11) desaturase-like Neighboring gene acyl-CoA Delta(11) desaturase Neighboring gene acyl-CoA Delta(11) desaturase Neighboring gene glutamyl aminopeptidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables stearoyl-CoA 9-desaturase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in unsaturated fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acyl-CoA Delta(11) desaturase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037641.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      2042747..2051510
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026440384.1 → XP_026296169.1  acyl-CoA Delta(11) desaturase isoform X1

      UniProtKB/TrEMBL
      A0A7M7L6I3, A0A8B8GZ85
      Conserved Domains (1) summary
      cd03505
      Location:62 → 302
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

    2. XM_026440385.1 → XP_026296170.1  acyl-CoA Delta(11) desaturase isoform X2

      UniProtKB/TrEMBL
      A0A7M7MKE4, A0A8B8GWR8
      Conserved Domains (1) summary
      cd03505
      Location:1 → 231
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

    RNA

    1. XR_003304590.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases