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    LOC552325 protein germ cell-less [ Apis mellifera (honey bee) ]

    Gene ID: 552325, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC552325
    Gene description
    protein germ cell-less
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    gcl; GB41373
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    Genomic context

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    Location:
    chromosome: LG5
    Exon count:
    8
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG5 NC_037642.1 (12652731..12655444, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG5 NC_007074.3 (12970335..12973130, complement)

    Linkage Group LG5 - NC_037642.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 423-like Neighboring gene uncharacterized LOC411664 Neighboring gene uncharacterized LOC102656586 Neighboring gene protein PFC0760c Neighboring gene high-affinity choline transporter 1 Neighboring gene uncharacterized LOC102656251

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in germ cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein germ cell-less
    Names
    germ cell-less

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037642.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      12652731..12655444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006569937.3 → XP_006570000.1  protein germ cell-less isoform X2

      UniProtKB/TrEMBL
      A0A7M7LT11, A0A8B6Z7H6
      Conserved Domains (2) summary
      smart00225
      Location:71 → 170
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:63 → 167
      BTB; BTB/POZ domain

    2. XM_624700.6 → XP_624703.1  protein germ cell-less isoform X1

      UniProtKB/TrEMBL
      A0A7M7TFV5, A0A8B9B4T2
      Conserved Domains (2) summary
      cd18305
      Location:55 → 169
      BTB_POZ_GCL; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster protein germ cell-less (GCL) and similar proteins
      cl28903
      Location:170 → 249
      BACK; BACK (BTB and C-terminal Kelch) domain
    Nucleotide Protein Strain
    Heading Accession and Version

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