U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC412588 tyrosine-protein kinase Src42A [ Apis mellifera (honey bee) ]

    Gene ID: 412588, updated on 11-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC412588
    Gene description
    tyrosine-protein kinase Src42A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB41082
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: LG1
    Exon count:
    9
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG1 NC_037638.1 (9087046..9095717, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG1 NC_007070.3 (10766885..10775928)

    Linkage Group LG1 - NC_037638.1Genomic Context describing neighboring genes Neighboring gene BAG family molecular chaperone regulator 2 Neighboring gene ras-related protein Rab-23 Neighboring gene ubiquitin carboxyl-terminal hydrolase 14 Neighboring gene guanine nucleotide-binding protein subunit beta-5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables non-membrane spanning protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extrinsic component of cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tyrosine-protein kinase Src42A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037638.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      9087046..9095717 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016917712.2 → XP_016773201.1  tyrosine-protein kinase Src42A isoform X2

      UniProtKB/TrEMBL
      A0A7M7IJX0, A0A8B7KRT0
      Conserved Domains (3) summary
      cd10370
      Location:128 → 223
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:69 → 120
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:239 → 504
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    2. XM_016917710.2 → XP_016773199.1  tyrosine-protein kinase Src42A isoform X1

      UniProtKB/TrEMBL
      A0A7M7IKK4, A0A8B7KSN2, A0A8U1DDH9
      Conserved Domains (3) summary
      cd10370
      Location:128 → 223
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:69 → 120
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:241 → 506
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    3. XM_006568135.3 → XP_006568198.1  tyrosine-protein kinase Src42A isoform X3

      See identical proteins and their annotated locations for XP_006568198.1

      UniProtKB/TrEMBL
      A0A7M7GW46, A0A7M7GWD7, A0A8B6Z501, A0A8B6Z533
      Conserved Domains (3) summary
      cd10370
      Location:117 → 212
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:58 → 109
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:230 → 495
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    4. XM_006568132.3 → XP_006568195.1  tyrosine-protein kinase Src42A isoform X3

      See identical proteins and their annotated locations for XP_006568195.1

      UniProtKB/TrEMBL
      A0A7M7GW46, A0A7M7GWD7, A0A8B6Z501, A0A8B6Z533
      Conserved Domains (3) summary
      cd10370
      Location:117 → 212
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:58 → 109
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:230 → 495
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    5. XM_006568130.3 → XP_006568193.1  tyrosine-protein kinase Src42A isoform X3

      See identical proteins and their annotated locations for XP_006568193.1

      UniProtKB/TrEMBL
      A0A7M7GW46, A0A7M7GWD7, A0A8B6Z501, A0A8B6Z533
      Conserved Domains (3) summary
      cd10370
      Location:117 → 212
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:58 → 109
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:230 → 495
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    6. XM_016917722.2 → XP_016773211.1  tyrosine-protein kinase Src42A isoform X4

      UniProtKB/TrEMBL
      A0A7M7ISX6, A0A8B7KRZ9
      Conserved Domains (3) summary
      cd10370
      Location:73 → 168
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:14 → 65
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:186 → 451
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    7. XM_006568131.3 → XP_006568194.1  tyrosine-protein kinase Src42A isoform X3

      See identical proteins and their annotated locations for XP_006568194.1

      UniProtKB/TrEMBL
      A0A7M7GW46, A0A7M7GWD7, A0A8B6Z501, A0A8B6Z533
      Conserved Domains (3) summary
      cd10370
      Location:117 → 212
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:58 → 109
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:230 → 495
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    8. XM_396043.7 → XP_396043.3  tyrosine-protein kinase Src42A isoform X3

      See identical proteins and their annotated locations for XP_396043.3

      UniProtKB/TrEMBL
      A0A7M7GW46, A0A7M7GWD7, A0A8B6Z501, A0A8B6Z533
      Conserved Domains (3) summary
      cd10370
      Location:117 → 212
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:58 → 109
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:230 → 495
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

    9. XM_006568133.3 → XP_006568196.1  tyrosine-protein kinase Src42A isoform X3

      See identical proteins and their annotated locations for XP_006568196.1

      UniProtKB/TrEMBL
      A0A7M7GW46, A0A7M7GWD7, A0A8B6Z501, A0A8B6Z533
      Conserved Domains (3) summary
      cd10370
      Location:117 → 212
      SH2_Src_Src42; Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)
      cd11845
      Location:58 → 109
      SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
      cd05068
      Location:230 → 495
      PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases