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    AY702102 cDNA sequence AY702102 [ Mus musculus (house mouse) ]

    Gene ID: 446211, updated on 8-Feb-2024

    Summary

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    Official Symbol
    AY702102provided by MGI
    Official Full Name
    cDNA sequence AY702102provided by MGI
    Primary source
    MGI:MGI:3525150
    See related
    Ensembl:ENSMUSG00000103935 AllianceGenome:MGI:3525150
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    STDP1
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    Genomic context

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    See AY702102 in Genome Data Viewer
    Location:
    2 H3; 2 89.91 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (169803933..169805107, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (169962013..169963187, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene teashirt zinc finger family member 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:169520657-169520858 Neighboring gene predicted gene, 34344 Neighboring gene STARR-seq mESC enhancer starr_06492 Neighboring gene predicted gene, 54131 Neighboring gene STARR-seq mESC enhancer starr_06495 Neighboring gene STARR-seq mESC enhancer starr_06496 Neighboring gene STARR-seq mESC enhancer starr_06499 Neighboring gene STARR-seq mESC enhancer starr_06500 Neighboring gene STARR-seq mESC enhancer starr_06501 Neighboring gene STARR-seq mESC enhancer starr_06502 Neighboring gene STARR-seq mESC enhancer starr_06503 Neighboring gene RIKEN cDNA A630075F10 gene Neighboring gene STARR-positive B cell enhancer ABC_E6026 Neighboring gene zinc finger protein 217

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and integrative analysis of 28 novel genes specifically expressed and developmentally regulated in murine spermatogenic cells. Hong S, et al. J Biol Chem, 2005 Mar 4. PMID 15613475
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • round spermatids protein STDP1

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_131974.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL731822
      Related
      ENSMUST00000194651.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      169803933..169805107 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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