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    DBP1 DNA-binding protein phosphatase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817102, updated on 7-Sep-2023

    Summary

    Gene symbol
    DBP1
    Gene description
    DNA-binding protein phosphatase 1
    Primary source
    Araport:AT2G25620
    Locus tag
    AT2G25620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtDBP1; DNA-binding protein phosphatase 1
    Summary
    Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (10902716..10905287, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Shaker pollen inward K+ channel Neighboring gene DNA-directed RNA polymerase subunit beta Neighboring gene ATPase, F0/V0 complex, subunit C protein Neighboring gene histone deacetylase-like protein Neighboring gene beta glucosidase 14

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_128120.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of defense response to virus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    DNA-binding protein phosphatase 1
    NP_180133.1
    • DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10902716..10905287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336005.1NP_001324148.1  DNA-binding protein phosphatase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SLA1
      UniProtKB/TrEMBL
      A0A178VZ04, A0A5S9X1B1
      Conserved Domains (1) summary
      PLN03145
      Location:3392
      PLN03145; Protein phosphatase 2c; Provisional
    2. NM_128120.2NP_180133.1  DNA-binding protein phosphatase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180133.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SLA1
      UniProtKB/TrEMBL
      A0A178VZ04, A0A5S9X1B1
      Conserved Domains (1) summary
      PLN03145
      Location:3392
      PLN03145; Protein phosphatase 2c; Provisional