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    AT1G19600 pfkB-like carbohydrate kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838547, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT1G19600
    Gene description
    pfkB-like carbohydrate kinase family protein
    Primary source
    Araport:AT1G19600
    Locus tag
    AT1G19600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14P1.7; F14P1_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (6778887..6781222)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene dehydroascorbate reductase Neighboring gene gamma carbonic anhydrase 1 Neighboring gene defensin-like protein Neighboring gene cytochrome P450, family 722, subfamily A, polypeptide 1 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_101816.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    pfkB-like carbohydrate kinase family protein
    NP_173390.1
    • pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6778887..6781222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101816.4 → NP_173390.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173390.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WA67, Q9LN35
      Conserved Domains (1) summary
      PLN02379
      Location:1 → 355
      PLN02379; pfkB-type carbohydrate kinase family protein
    Nucleotide Protein
    Heading Accession and Version

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