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    BBX32 B-box 32 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821667, updated on 7-Sep-2023

    Summary

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    Gene symbol
    BBX32
    Gene description
    B-box 32
    Primary source
    Araport:AT3G21150
    Locus tag
    AT3G21150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtBBX32; B-box 32; B-box domain protein 32; EIP6; EMF1-Interacting Protein 6
    Summary
    Encodes a protein with a B-box domain predicted to act as a transcription factor. Expression of the BBX32 gene is affected by monochromatic red light.
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (7412445..7413727, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene Pyridoxamine 5'-phosphate oxidase family protein Neighboring gene alpha-mannosidase 2 Neighboring gene F-box/associated interaction domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. B-box protein BBX32 integrates light and brassinosteroid signals to inhibit cotyledon opening. Ravindran N, et al. Plant Physiol, 2021 Sep 4. PMID 34618149, Free PMC Article
    2. Time-series transcriptomics reveals a BBX32-directed control of acclimation to high light in mature Arabidopsis leaves. Alvarez-Fernandez R, et al. Plant J, 2021 Sep. PMID 34160110
    3. Involvement of the N-terminal B-box domain of Arabidopsis BBX32 protein in interaction with soybean BBX62 protein. Qi Q, et al. J Biol Chem, 2012 Sep 7. PMID 22801428, Free PMC Article
    4. Expression of the Arabidopsis thaliana BBX32 gene in soybean increases grain yield. Preuss SB, et al. PLoS One, 2012. PMID 22363475, Free PMC Article
    5. Arabidopsis B-BOX32 interacts with CONSTANS-LIKE3 to regulate flowering. Tripathi P, et al. Proc Natl Acad Sci U S A, 2017 Jan 3. PMID 27999181, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. B-box protein BBX32 integrates light and brassinosteroid signals to inhibit cotyledon opening.
      Title: B-box protein BBX32 integrates light and brassinosteroid signals to inhibit cotyledon opening.
    2. Time-series transcriptomics reveals a BBX32-directed control of acclimation to high light in mature Arabidopsis leaves.
      Title: Time-series transcriptomics reveals a BBX32-directed control of acclimation to high light in mature Arabidopsis leaves.
    3. COL3 targets FT in the presence of BBX32 to regulate the flowering pathway.
      Title: Arabidopsis B-BOX32 interacts with CONSTANS-LIKE3 to regulate flowering.
    4. Involvement of the N-terminal B-box domain of Arabidopsis BBX32 protein in interaction with soybean BBX62 protein.
      Title: Involvement of the N-terminal B-box domain of Arabidopsis BBX32 protein in interaction with soybean BBX62 protein.
    5. These findings demonstrate a specific role for AtBBX32 in modulating soybean development, and demonstrate the validity of expressing single genes in crops to deliver increased agricultural productivity.
      Title: Expression of the Arabidopsis thaliana BBX32 gene in soybean increases grain yield.
    6. BBX32 interacts with SALT TOLERANCE HOMOLOG2/BBX21, another B-box protein previously shown to interact with HY5.
      Title: BBX32, an Arabidopsis B-Box protein, functions in light signaling by suppressing HY5-regulated gene expression and interacting with STH2/BBX21.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_113009.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within blue light signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of DNA-templated transcription IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within photomorphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within red or far-red light signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of flower development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-box 32
    NP_188752.1
    • B-box 32 (BBX32); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 926 Blast hits to 858 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 926; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7412445..7413727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113009.3 → NP_188752.1  B-box 32 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188752.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LJB7
      UniProtKB/TrEMBL
      A0A178V704, A0A5S9XE54
      Conserved Domains (1) summary
      cd19821
      Location:5 → 46
      Bbox1_BBX-like; B-box-type 1 zinc finger found in B-box (BBX) family of plant transcription factors and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LJB7.1

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