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    MSM_RS07320 LL-diaminopimelate aminotransferase [ Methanobrevibacter smithii ATCC 35061 ]

    Gene ID: 5216858, updated on 8-Dec-2022

    Summary

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    Gene symbol
    MSM_RS07320
    Gene description
    LL-diaminopimelate aminotransferase
    Locus tag
    MSM_RS07320
    Gene type
    protein coding
    Organism
    Methanobrevibacter smithii ATCC 35061 (strain: ATCC 35061; PS; DSMZ 861, type-material: type strain of Methanobrevibacter smithii)
    Lineage
    Archaea; Euryarchaeota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter
    Old locus tag
    Msm_1455
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    Genomic context

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    Sequence:
    NC_009515.1 (1479806..1481041)

    NC_009515.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DUF6882 domain-containing protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009515.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of LL-diaminopimelate aminotransferase from Arabidopsis thaliana: a recently discovered enzyme in the biosynthesis of L-lysine by plants and Chlamydia. Watanabe N, et al. J Mol Biol, 2007 Aug 17. PMID 17583737
    2. L,L-diaminopimelate aminotransferase, a trans-kingdom enzyme shared by Chlamydia and plants for synthesis of diaminopimelate/lysine. McCoy AJ, et al. Proc Natl Acad Sci U S A, 2006 Nov 21. PMID 17093042, Free PMC Article
    3. Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut. Samuel BS, et al. Proc Natl Acad Sci U S A, 2007 Jun 19. PMID 17563350, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LL-diaminopimelate aminotransferase
    WP_004033324.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009515.1 Reference assembly

      Range
      1479806..1481041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004033324.1 MULTISPECIES: LL-diaminopimelate aminotransferase [Methanobrevibacter]

      See identical proteins and their annotated locations for WP_004033324.1

      UniProtKB/Swiss-Prot
      A5UN82
      UniProtKB/TrEMBL
      A0A1D2WW68, A0A843LMD2, D2ZQH7, R7PWF7
      Conserved Domains (2) summary
      cd00609
      Location:38 → 408
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK07590
      Location:2 → 409
      PRK07590; L,L-diaminopimelate aminotransferase; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A5UN82.1

    Gene LinkOut

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