U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TVAGG3_1006980 calcium-dependent cysteine-type endopeptidase protein [ Trichomonas vaginalis G3 ]

    Gene ID: 4753472, updated on 23-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    TVAGG3_1006980
    Gene description
    calcium-dependent cysteine-type endopeptidase protein
    Locus tag
    TVAGG3_1006980
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v1006980
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_067203.1 (18367624..18372395)

    Chromosome I - NC_067203.1Genomic Context describing neighboring genes Neighboring gene transcription-initiator DNA-binding domain ibd family Neighboring gene hypothetical protein Neighboring gene leucine-rich repeats (6 copies)-containing protein Neighboring gene regulation of vacuole fusion, non-autophagic

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_067203.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    calcium-dependent cysteine-type endopeptidase protein
    XP_001308640.1
    • Deepfry function prediction from predicted structure:inorganic molecular entity transmembrane transporter activity;eggNOG seed ortholog:5722.XP_001308640.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067203.1 Reference assembly

      Range
      18367624..18372395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001308639.1 → XP_001308640.1  calcium-dependent cysteine-type endopeptidase protein [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001308640.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2FHB3
      Conserved Domains (3) summary
      cd06174
      Location:537 → 815
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cl00051
      Location:1013 → 1283
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cl19549
      Location:950 → 1028
      DUF505; Protein of unknown function (DUF505)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases