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    ASXL2 additional sex combs like 2, transcriptional regulator [ Gallus gallus (chicken) ]

    Gene ID: 421993, updated on 4-Apr-2024

    Summary

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    Symbol
    ASXL2provided by CGNC
    Full Name
    additional sex combs like 2, transcriptional regulatorprovided by CGNC
    Primary source
    CGNC:51588
    See related
    Ensembl:ENSGALG00010009383
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (104583193..104672896, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (104347748..104437370, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417862 Neighboring gene DNA methyltransferase 3 alpha Neighboring gene dystrobrevin beta Neighboring gene uncharacterized LOC112532109 Neighboring gene kinesin family member 3C Neighboring gene RAB10, member RAS oncogene family Neighboring gene GRB2 associated regulator of MAPK1 subtype 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxisome proliferator activated receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PR-DUB complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative Polycomb group protein ASXL2
    Names
    ASXL transcriptional regulator 2
    additional sex combs like transcriptional regulator 2
    additional sex combs-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031096.1 → NP_001026267.1  putative Polycomb group protein ASXL2

      See identical proteins and their annotated locations for NP_001026267.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ719496
      UniProtKB/Swiss-Prot
      Q5ZM88
      UniProtKB/TrEMBL
      A0A8V0XX86
      Related
      ENSGALP00010012891.1, ENSGALT00010022399.1
      Conserved Domains (3) summary
      pfam05066
      Location:11 → 83
      HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
      pfam13919
      Location:264 → 384
      ASXH; Asx homology domain
      pfam13922
      Location:1350 → 1410
      PHD_3; PHD domain of transcriptional enhancer, Asx

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      104583193..104672896 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015285098.4 → XP_015140584.3  putative Polycomb group protein ASXL2 isoform X1

      Related
      ENSGALP00010012896.1, ENSGALT00010022404.1

    2. XM_046938957.1 → XP_046794913.1  putative Polycomb group protein ASXL2 isoform X3

    3. XM_046938956.1 → XP_046794912.1  putative Polycomb group protein ASXL2 isoform X2

    4. XM_040697227.2 → XP_040553161.1  putative Polycomb group protein ASXL2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y1Q1
      Conserved Domains (2) summary
      PHA03247
      Location:296 → 767
      PHA03247; large tegument protein UL36; Provisional
      pfam13922
      Location:1186 → 1246
      PHD_3; PHD domain of transcriptional enhancer, Asx

    5. XM_015285100.4 → XP_015140586.1  putative Polycomb group protein ASXL2 isoform X4

      UniProtKB/TrEMBL
      A0A3Q2UB41, A0A8V0Y1Q1
      Related
      ENSGALP00010012883.1, ENSGALT00010022391.1
      Conserved Domains (2) summary
      pfam13919
      Location:140 → 260
      ASXH; Asx homology domain
      pfam13922
      Location:1226 → 1286
      PHD_3; PHD domain of transcriptional enhancer, Asx

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      104347748..104437370 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914227.1 → XP_046770183.1  putative Polycomb group protein ASXL2 isoform X1

    2. XM_046914229.1 → XP_046770185.1  putative Polycomb group protein ASXL2 isoform X3

    3. XM_046914228.1 → XP_046770184.1  putative Polycomb group protein ASXL2 isoform X2

    4. XM_046914231.1 → XP_046770187.1  putative Polycomb group protein ASXL2 isoform X5

    5. XM_046914230.1 → XP_046770186.1  putative Polycomb group protein ASXL2 isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZM88.1 GenPept UniProtKB/Swiss-Prot:Q5ZM88

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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