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    anp32a.L acidic nuclear phosphoprotein 32 family member A L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 398775, updated on 11-Apr-2024

    Summary

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    Official Symbol
    anp32a.L
    Official Full Name
    acidic nuclear phosphoprotein 32 family member A L homeolog
    Primary source
    Xenbase:XB-GENE-982555
    Locus tag
    XELAEV_18018469mg
    See related
    EnsemblRapid:ENSXLAG00005001135
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    anp32a
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    Genomic context

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    Location:
    chromosome: 3L
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (124500217..124514648, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (109100541..109114910, complement)

    Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 11 L homeolog Neighboring gene coronin, actin binding protein, 2B L homeolog Neighboring gene glucuronic acid epimerase L homeolog Neighboring gene progestin and adipoQ receptor family member V L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Anp32 family of proteins containing leucine-rich repeats. Matilla A, et al. Cerebellum, 2005. PMID 15895553
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within nucleocytoplasmic transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within nucleocytoplasmic transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in perinuclear region of cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    acidic leucine-rich nuclear phosphoprotein 32 family member A
    Names
    acidic (leucine-rich) nuclear phosphoprotein 32 family, member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089687.1 → NP_001083156.1  acidic leucine-rich nuclear phosphoprotein 32 family member A

      See identical proteins and their annotated locations for NP_001083156.1

      Status: PROVISIONAL

      Source sequence(s)
      BC060336
      UniProtKB/Swiss-Prot
      Q6PAF6
      UniProtKB/TrEMBL
      A0A974DFB4
      Related
      ENSXLAP00005003447.1, ENSXLAT00005003509.1
      Conserved Domains (2) summary
      sd00033
      Location:90 → 114
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:88 → 130
      LRR_4; Leucine Rich repeats (2 copies)

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      124500217..124514648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018250837.2 → XP_018106326.1  acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1

      UniProtKB/TrEMBL
      A0A8J0UM09
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6PAF6.1 GenPept UniProtKB/Swiss-Prot:Q6PAF6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.