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    rluD pseudouridine synthase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1254185, updated on 6-Oct-2023

    Summary

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    Gene symbol
    rluD
    Gene description
    pseudouridine synthase
    Locus tag
    STM2662
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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    Genomic context

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    Sequence:
    NC_003197.2 (2805550..2806542, complement)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene 16S ribosomal RNA Neighboring gene ATP-dependent protease Neighboring gene putative inner membrane protein Neighboring gene putative lipoprotein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    General gene information

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    regulatory

    • Loc: c2805564-2805559 regulatory_class = ribosome_binding_site
    • Loc: c2806542-2806537 regulatory_class = ribosome_binding_site

    General protein information

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    Preferred Names
    pseudouridine synthase
    NP_461593.1
    • pseudouridines 1911, 1915, 1917 in 23S RNA; similar to E. coli suppressor of ftsH mutation (AAC75643.1); Blastp hit to AAC75643.1 (326 aa), 93% identity in aa 1 - 326

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      2805550..2806542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_461593.1 pseudouridine synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_461593.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A379UUL5, A0A4Z0KQG7, A0A5T5W7W2, A0A5U2MB75, A0A5V4QJ47, A0A5W2M3W4, A0A5W5ZP89, A0A5X7K350, A0A5Y3KKG1, A0A609JJ68, A0A631RGY9, A0A6Y1VN42, A0A712CG18, A0A721WAI5, A0A726SUL8, A0A748G059, A0A748I1A8, A0A748J819, A0A749T7X3
      Conserved Domains (1) summary
      PRK11180
      Location:1 → 325
      rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P65836.2

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    Other Literature Sources
    Molecular Biology Databases