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    NFKBIA NFKB inhibitor alpha [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100402266, updated on 8-Mar-2024

    Summary

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    Gene symbol
    NFKBIA
    Gene description
    NFKB inhibitor alpha
    See related
    Ensembl:ENSCJAG00000006806
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (65788036..65791720, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (66421412..66425257, complement)

    Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene tropomyosin alpha-1 chain-like Neighboring gene 60S acidic ribosomal protein P0-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC128928801

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NF-kappa-B inhibitor alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071451.1 Reference mCalJa1.2.pat.X

      Range
      65788036..65791720 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002753821.5 → XP_002753867.1  NF-kappa-B inhibitor alpha

      See identical proteins and their annotated locations for XP_002753867.1

      UniProtKB/TrEMBL
      A0A8I3X242, F6QL78, U3EDW5
      Related
      ENSCJAP00000035068.2
      Conserved Domains (3) summary
      cd00204
      Location:101 → 233
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:139 → 176
      ANK; ANK repeat [structural motif]
      cl26073
      Location:23 → 147
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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