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FraEuI1c_4744 DNA polymerase LigD, ligase domain-containing protein [ Frankia sp. EuI1c ]

Gene ID: 9975186, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
FraEuI1c_4744
Gene description
DNA polymerase LigD, ligase domain-containing protein
Locus tag
FraEuI1c_4744
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Frankia sp. EuI1c (strain: EuI1c)
Lineage
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Frankiaceae; Frankia

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA polymerase LigD, ligase domain-containing protein
YP_004018605.1
  • KEGG: fal:FRAAL4382 hypothetical protein
    TIGRFAM: DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein
    PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014666.1 Reference assembly

    Range
    5813875..5815551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004018605.1 DNA polymerase LigD, ligase domain-containing protein [Frankia sp. EuI1c]

    Status: PROVISIONAL