These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001252078.1 → NP_001239007.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC079035, AF153604, DB451322
- UniProtKB/Swiss-Prot
-
Q9Y4E8
- Conserved Domains (3) summary
-
- cd02674
Location:784 – 931
Blast Score: 507
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:289 – 477
Blast Score: 257
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl12116
Location:24 – 121
Blast Score: 282
- DUSP; DUSP domain
-
NM_001252079.1 → NP_001239008.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and lacks a large portion of the 3' coding region, compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AI027693, BC063454, DB451322
- UniProtKB/TrEMBL
-
Q9H8G9
- Conserved Domains (1) summary
-
- cl12116
Location:24 – 121
Blast Score: 269
- DUSP; DUSP domain
-
NM_006313.2 → NP_006304.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC079035, AF106069, BC125123, DB451322
- Consensus CDS
-
CCDS8963.1
- UniProtKB/TrEMBL
-
Q08AL5
- UniProtKB/Swiss-Prot
-
Q9Y4E8
- Related
- ENSP00000258123, OTTHUMP00000243158, ENST00000353364, OTTHUMT00000407833
- Conserved Domains (3) summary
-
- cd02674
Location:755 – 902
Blast Score: 506
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:260 – 448
Blast Score: 257
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl12116
Location:24 – 121
Blast Score: 282
- DUSP; DUSP domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000012.11 Reference GRCh37.p5 Primary Assembly
- Range
- 62654187..62799898
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000144.1 Alternate HuRef
- Range
- 59705123..59851058
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)