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    EIO_1349 branched-chain amino acid ABC transporter permease [ Ketogulonicigenium vulgare Y25 ]

    Gene ID: 9871972, updated on 17-Oct-2012
    Gene symbol
    EIO_1349
    Gene description
    branched-chain amino acid ABC transporter permease
    Locus tag
    EIO_1349
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ketogulonicigenium vulgare Y25 (strain: Y25)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium
    Sequence :
    NC_014625.1 (1296524..1297867, complement)

    NC_014625.1Genomic Context describing neighboring genes Neighboring gene penicillin amidase family protein Neighboring gene 3-hydroxyisobutyrate dehydrogenase Neighboring gene branched-chain amino acid ABC transporter inner membrane protein Neighboring gene branched-chain amino acid ABC transporter ATP-binding protein Neighboring gene ABC transporter Neighboring gene branched-chain amino acid ABC transporter substrate-binding protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence of the bacterium Ketogulonicigenium vulgare Y25. Xiong XH, et al. J Bacteriol, 2011 Jan. PMID 21037005.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • ABC transporters, organism-specific biosystem (from KEGG)
      ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • ABC transporters, conserved biosystem (from KEGG)
      ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • Branched-chain amino acid transport system, organism-specific biosystem (from KEGG)
      Branched-chain amino acid transport system, organism-specific biosystemStructural complex; Environmental information processing; Phosphate and amino acid transport system
    Names
    branched-chain amino acid ABC transporter permease

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014625.1

      Range
      1296524..1297867, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003963784.1 branched-chain amino acid ABC transporter permease [Ketogulonicigenium vulgare Y25]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E3F0R9
      Conserved Domains (1) summary
      cd06581
      Location:179 – 399
      Blast Score: 346
      TM_PBP1_LivM_like; Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP002224.1 ADO42484.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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