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Trmt1l tRNA methyltransferase 1 like [ Mus musculus (house mouse) ]

Gene ID: 98685, updated on 8-May-2016
Official Symbol
Trmt1lprovided by MGI
Official Full Name
tRNA methyltransferase 1 likeprovided by MGI
Primary source
MGI:MGI:1916185
See related
Ensembl:ENSMUSG00000053286 Vega:OTTMUSG00000049568
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Trm1l; C1orf25; AW226554; Trm1-like; 1190005F20Rik
Orthologs
Location:
1; 1 G2
Exon count:
15
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 1 NC_000067.6 (151428547..151458183)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (153275778..153305313)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene influenza virus NS1A binding protein Neighboring gene SWT1 RNA endoribonuclease homolog (S. cerevisiae) Neighboring gene microRNA 7682 Neighboring gene ring finger protein 2 Neighboring gene predicted gene, 36527 Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial pseudogene

  • mRNA processing, organism-specific biosystem (from WikiPathways)
    mRNA processing, organism-specific biosystemAdapted from Reactome, see: [http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=REACT_1675.1 REACT 1675.1] This process describes the conversion of precursor messenger RNA into mature messenge...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC70241

Gene Ontology Provided by MGI

Function Evidence Code Pubs
1-hydroxy-6-methoxypyrene methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
1-hydroxypyrene methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
1-phenanthrol methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
2-phytyl-1,4-naphthoquinone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
4,5-dihydroxybenzo(a)pyrene methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
C-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
DNA-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
P-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
RNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
S-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
Se-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
arginine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
cobalt-precorrin-3 C17-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
cobalt-precorrin-5B C1-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
cobalt-precorrin-6B C5-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
cobalt-precorrin-7 C15-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
demethylmenaquinone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
dimethylamine methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
dimethylarsinite methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
hydroxyneurosporene-O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
lysine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
mRNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
methanol-specific methylcobalamin:coenzyme M methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
methylarsonite methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
monomethylamine methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
phosphomethylethanolamine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
protein C-terminal carboxyl O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein C-terminal leucine carboxyl O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein-arginine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein-arginine N5-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein-lysine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (adenine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (adenine-N6-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (cytosine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (cytosine-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (cytosine-C5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (cytosine-N4-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (uridine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA (uridine-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
rRNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
selenocysteine methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (adenine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (adenine-57, 58-N(1)-) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (adenine-N1-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (cytosine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (cytosine-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (cytosine-3-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (cytosine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (guanine-N1-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (guanine-N2-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (uracil) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA (uracil-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA binding IEA
Inferred from Electronic Annotation
more info
 
tRNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
trihydroxyferuloyl spermidine O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
trimethylamine methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
adult behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
adult locomotory behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
behavior IEA
Inferred from Electronic Annotation
more info
 
methylation IEA
Inferred from Electronic Annotation
more info
 
tRNA processing IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026876.3NP_081152.2  TRMT1-like protein

    See identical proteins and their annotated locations for NP_081152.2

    Status: VALIDATED

    Source sequence(s)
    AI853808, AK146088, BC110425
    Consensus CDS
    CCDS15361.1
    UniProtKB/Swiss-Prot
    A2RSY6
    UniProtKB/TrEMBL
    A0A0R4J0U8
    Related
    ENSMUSP00000068309, OTTMUSP00000068333, ENSMUST00000065625, OTTMUST00000126327
    Conserved Domains (1) summary
    cd02440
    Location:277387
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p3 C57BL/6J

    Range
    151428547..151458183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006529976.1XP_006530039.1  

    Conserved Domains (1) summary
    cd02440
    Location:277387
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
  2. XM_011248113.1XP_011246415.1  

    See identical proteins and their annotated locations for XP_011246415.1

    Conserved Domains (1) summary
    cl17173
    Location:16419
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

Alternate Mm_Celera

Genomic

  1. AC_000023.1 Alternate Mm_Celera

    Range
    153857643..153887243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)