These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001037937.2 → NP_001033026.1 DEP domain-containing mTOR-interacting protein isoform b
Status: PROVISIONAL
- Source sequence(s)
-
AC124659
- Consensus CDS
-
CCDS27475.1
- UniProtKB/TrEMBL
-
B2ZRS7
- UniProtKB/Swiss-Prot
-
Q570Y9
- Related
- ENSMUSP00000023056, OTTMUSP00000029175, ENSMUST00000023056, OTTMUST00000059893
- Conserved Domains (3) summary
-
- cd00992
Location:327 – 391
Blast Score: 88
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd04441
Location:121 – 204
Blast Score: 398
- DEP_2_DEP6; DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
- cl02442
Location:29 – 105
Blast Score: 388
- DEP; DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is ...
-
NM_145470.2 → NP_663445.2 DEP domain-containing mTOR-interacting protein isoform a
Status: PROVISIONAL
- Source sequence(s)
-
AK220300
- Consensus CDS
-
CCDS27474.1
- UniProtKB/TrEMBL
-
B2ZRS3
- UniProtKB/Swiss-Prot
-
Q570Y9
- Conserved Domains (3) summary
-
- cd00992
Location:339 – 403
Blast Score: 87
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd04441
Location:133 – 216
Blast Score: 389
- DEP_2_DEP6; DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
- cd04442
Location:36 – 117
Blast Score: 409
- DEP_1_DEP6; DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCm38.p1 C57BL/6J
Genomic
-
NC_000081.6 Reference GRCm38.p1 C57BL/6J
- Range
- 55112483..55254202
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate Mm_Celera
Genomic
-
AC_000037.1 Alternate Mm_Celera
- Range
- 56652905..56794634
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)