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    Saut_1607 GTP-binding protein LepA [ Sulfurimonas autotrophica DSM 16294 ]

    Gene ID: 9759156, updated on 17-Oct-2012
    Gene symbol
    Saut_1607
    Gene description
    GTP-binding protein LepA
    Locus tag
    Saut_1607
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sulfurimonas autotrophica DSM 16294
    Lineage
    Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas
    Location :
    isolation source: deep-sea sediments at the Hatoma Knoll in the Mid-Okinawa Trough hydrothermal field, country: Japan
    Sequence :
    NC_014506.1 (1600355..1602145)

    NC_014506.1Genomic Context describing neighboring genes Neighboring gene Fur family ferric uptake regulator Neighboring gene ribose-phosphate pyrophosphokinase Neighboring gene transformation system protein Neighboring gene hypothetical protein Neighboring gene GrpE protein HSP-70 cofactor

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence of Sulfurimonas autotrophica type strain (OK10). Sikorski J, et al. Stand Genomic Sci, 2010 Oct 27. PMID 21304749.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    GTP-binding protein LepA
    YP_003892666.1
    • COGs: COG0481 Membrane GTPase LepA~InterPro IPR000795:IPR000640:IPR013842:IPR004161:IPR 006297:IPR005225~KEGG: tdn:Suden_1637 GTP-binding protein LepA~PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding~SPTR: Q30Q17 GTP-binding protein lepA~TIGRFAM: GTP-binding protein LepA; small GTP-binding protein~PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus~TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014506.1

      Range
      1600355..1602145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003892666.1 GTP-binding protein LepA [Sulfurimonas autotrophica DSM 16294]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E0UV72
      Conserved Domains (5) summary
      cd03709
      Location:401 – 480
      Blast Score: 344
      lepA_C; lepA_C: This family represents the C-terminal region of LepA, a GTP-binding protein localized in the cytoplasmic membrane. LepA is ubiquitous in Bacteria and Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is missing from Archaea. LepA exhibits ...
      PRK05433
      Location:1 – 596
      Blast Score: 2956
      PRK05433; GTP-binding protein LepA; Provisional
      pfam06421
      Location:488 – 595
      Blast Score: 495
      LepA_C; GTP-binding protein LepA C-terminus
      cd01890
      Location:5 – 182
      Blast Score: 903
      LepA; LepA also known as Elongation Factor 4 (EF4)
      cl02787
      Location:191 – 276
      Blast Score: 240
      Translation_Factor_II_like; Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor Tu consists of three structural domains, this family represents the second domain. Domain II adopts a beta barrel structure and is involved in binding to ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP002205.1 ADN09654.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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