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HDAC9 histone deacetylase 9 [ Homo sapiens (human) ]

Gene ID: 9734, updated on 15-Jul-2015
Official Symbol
HDAC9provided by HGNC
Official Full Name
histone deacetylase 9provided by HGNC
Primary source
HGNC:HGNC:14065
See related
Ensembl:ENSG00000048052; HPRD:05944; MIM:606543; Vega:OTTHUMG00000152487
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HD7; HD9; HD7b; HDAC; HDRP; MITR; HDAC7; HDAC7B; HDAC9B; HDAC9FL
Summary
Histones play a critical role in transcriptional regulation, cell cycle progression, and developmental events. Histone acetylation/deacetylation alters chromosome structure and affects transcription factor access to DNA. The protein encoded by this gene has sequence homology to members of the histone deacetylase family. This gene is orthologous to the Xenopus and mouse MITR genes. The MITR protein lacks the histone deacetylase catalytic domain. It represses MEF2 activity through recruitment of multicomponent corepressor complexes that include CtBP and HDACs. This encoded protein may play a role in hematopoiesis. Multiple alternatively spliced transcripts have been described for this gene but the full-length nature of some of them has not been determined. [provided by RefSeq, Jul 2008]
Orthologs
See HDAC9 in Epigenomics, MapViewer
Location:
7p21.1
Exon count:
38
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 7 NC_000007.14 (18086942..18999521)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (18126572..19039135)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene RNA methyltransferase like 1 pseudogene 2 Neighboring gene phosphoribosyl pyrophosphate synthetase 1-like 1 Neighboring gene microRNA 1302-6 Neighboring gene uncharacterized LOC105375178 Neighboring gene casein kinase 1, alpha 1 pseudogene Neighboring gene uncharacterized LOC105375177 Neighboring gene uncharacterized LOC105375176 Neighboring gene uncharacterized LOC105375175 Neighboring gene nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 13 Neighboring gene uncharacterized LOC105375174 Neighboring gene twist family bHLH transcription factor 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NHGRI GWAS Catalog

Description
Genetic predictors of medically refractory ulcerative colitis.
NHGRI GWA Catalog
Genetic risk factors for ischaemic stroke and its subtypes (the METASTROKE collaboration): a meta-analysis of genome-wide association studies.
NHGRI GWA Catalog
Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
NHGRI GWA Catalog
Genome-wide association study identifies a variant in HDAC9 associated with large vessel ischemic stroke.
NHGRI GWA Catalog
Genome-Wide Association Study of Intracranial Aneurysm Identifies a New Association on Chromosome 7.
NHGRI GWA Catalog
Genome-wide association study of peripheral neuropathy with D-drug-containing regimens in AIDS Clinical Trials Group protocol 384.
NHGRI GWA Catalog
Genome-wide association study of retinopathy in individuals without diabetes.
NHGRI GWA Catalog
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
NHGRI GWA Catalog
Shared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants.
NHGRI GWA Catalog
Six novel susceptibility Loci for early-onset androgenetic alopecia and their unexpected association with common diseases.
NHGRI GWA Catalog
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    Signaling events mediated by HDAC Class I, organism-specific biosystem
    Signaling events mediated by HDAC Class I
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    Signaling events mediated by HDAC Class II, organism-specific biosystem
    Signaling events mediated by HDAC Class II
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Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • KIAA0744, DKFZp779K1053

Gene Ontology Provided by GOA

Function Evidence Code Pubs
NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
Inferred from Electronic Annotation
more info
 
histone deacetylase activity IDA
Inferred from Direct Assay
more info
PubMed 
NOT histone deacetylase activity IDA
Inferred from Direct Assay
more info
PubMed 
histone deacetylase binding IDA
Inferred from Direct Assay
more info
PubMed 
histone deacetylase binding IPI
Inferred from Physical Interaction
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein deacetylase activity IDA
Inferred from Direct Assay
more info
PubMed 
protein kinase C binding IPI
Inferred from Physical Interaction
more info
PubMed 
repressing transcription factor binding IDA
Inferred from Direct Assay
more info
PubMed 
repressing transcription factor binding IPI
Inferred from Physical Interaction
more info
PubMed 
repressing transcription factor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
transcription corepressor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
transcription factor binding IDA
Inferred from Direct Assay
more info
PubMed 
transcription factor binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
B cell activation TAS
Traceable Author Statement
more info
PubMed 
B cell differentiation TAS
Traceable Author Statement
more info
PubMed 
Notch signaling pathway TAS
Traceable Author Statement
more info
 
cellular response to insulin stimulus IDA
Inferred from Direct Assay
more info
PubMed 
heart development ISS
Inferred from Sequence or Structural Similarity
more info
 
histone H3 deacetylation IDA
Inferred from Direct Assay
more info
PubMed 
histone H4 deacetylation IDA
Inferred from Direct Assay
more info
PubMed 
histone deacetylation IDA
Inferred from Direct Assay
more info
PubMed 
inflammatory response TAS
Traceable Author Statement
more info
PubMed 
negative regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
negative regulation of transcription, DNA-templated IDA
Inferred from Direct Assay
more info
PubMed 
neuron differentiation IEA
Inferred from Electronic Annotation
more info
 
peptidyl-lysine deacetylation IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of cell migration involved in sprouting angiogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of skeletal muscle fiber development ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of striated muscle cell differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
response to amphetamine IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm TAS
Traceable Author Statement
more info
PubMed 
histone deacetylase complex TAS
Traceable Author Statement
more info
PubMed 
histone methyltransferase complex ISS
Inferred from Sequence or Structural Similarity
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
transcription factor complex IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
histone deacetylase 9
Names
MEF-2 interacting transcription repressor (MITR) protein
histone deacetylase 4/5-related protein
histone deacetylase 7B
NP_001191073.1
NP_001191074.1
NP_001191075.1
NP_001191076.1
NP_001191077.1
NP_055522.1
NP_478056.1
NP_848510.1
NP_848512.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023250.2 RefSeqGene

    Range
    5001..915422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001204144.1NP_001191073.1  histone deacetylase 9 isoform 6

    See identical proteins and their annotated locations for NP_001191073.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR and coding sequence, the 3' UTR and coding sequence, and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (6) is longer at the N-terminus, has a shorter and distinct C-terminus, and lacks an internal segment compared to isoform 1.
    Source sequence(s)
    AK304298, BC150328
    Consensus CDS
    CCDS56465.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (1) summary
    cl13614
    Location:80166
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
  2. NM_001204145.1NP_001191074.1  histone deacetylase 9 isoform 7

    See identical proteins and their annotated locations for NP_001191074.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) has an extended 5' UTR, differs in the 3' UTR and coding sequence, and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (7) has a shorter and distinct C-terminus and lacks an internal segment compared to isoform 1.
    Source sequence(s)
    AB018287, AK297404, BC150328
    Consensus CDS
    CCDS56466.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (1) summary
    cl13614
    Location:38124
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
  3. NM_001204146.1NP_001191075.1  histone deacetylase 9 isoform 8

    See identical proteins and their annotated locations for NP_001191075.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) has an extended 5' UTR, differs in the 3' UTR and coding sequence, lacks an alternate in-frame exon, and uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (8) has a shorter and distinct C-terminus, lacks an internal segment, and contains an alternate short internal segment compared to isoform 1.
    Source sequence(s)
    AB018287, AC002433, AK316109, BC150328
    Consensus CDS
    CCDS75565.1
    UniProtKB/TrEMBL
    B7Z3P7
    UniProtKB/Swiss-Prot
    Q9UKV0
    Related
    ENSP00000478829, ENST00000622668
    Conserved Domains (1) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
  4. NM_001204147.1NP_001191076.1  histone deacetylase 9 isoform 9

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9) differs in the 5' UTR and coding sequence, the 3' UTR and coding sequence, and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (9) is shorter at the N-terminus, has a shorter and distinct C-terminus, and lacks an internal segment compared to isoform 1.
    Source sequence(s)
    AK304343, AK304410, BC150328, DC369193
    Consensus CDS
    CCDS56468.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (1) summary
    cl13614
    Location:793
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
  5. NM_001204148.1NP_001191077.1  histone deacetylase 9 isoform 10

    See identical proteins and their annotated locations for NP_001191077.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10) differs in the 5' UTR and coding sequence, the 3' UTR and coding sequence, and uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (10) is shorter at the N-terminus, has a shorter and distinct C-terminus, and contains an alternate internal segment compared to isoform 1.
    Source sequence(s)
    AC002124, AK304343, AK304410, BC150328, DC369193
    Consensus CDS
    CCDS56467.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (1) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
  6. NM_014707.1NP_055522.1  histone deacetylase 9 isoform 3

    See identical proteins and their annotated locations for NP_055522.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) lacks multiple 3' exons and has an alternate 3' segment including the coding region and UTR, compared to variant 1. The resulting isoform 3, also known as HDRP, has a much shorter and distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AB018287
    Consensus CDS
    CCDS47557.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Related
    ENSP00000384382, OTTHUMP00000201767, ENST00000405010, OTTHUMT00000326406
    Conserved Domains (1) summary
    cl13614
    Location:38124
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
  7. NM_058176.2NP_478056.1  histone deacetylase 9 isoform 1

    See identical proteins and their annotated locations for NP_478056.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the predominant isoform (1).
    Source sequence(s)
    AA405905, AB018287, AY032737
    Consensus CDS
    CCDS47555.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Related
    ENSP00000410337, OTTHUMP00000225262, ENST00000432645, OTTHUMT00000376176
    Conserved Domains (2) summary
    cd10163
    Location:38124
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd10009
    Location:6311009
    HDAC9; Histone deacetylase 9
  8. NM_178423.1NP_848510.1  histone deacetylase 9 isoform 4

    See identical proteins and their annotated locations for NP_848510.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) has an alternate 3' sequence including the coding region and UTR, compared to variant 1. The resulting isoform 4, also known as HDAC9fl, has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AJ459808
    Consensus CDS
    CCDS47554.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (2) summary
    cd10163
    Location:38124
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6311008
    HDAC_classIIa; Histone deacetylases, class IIa
  9. NM_178425.2NP_848512.1  histone deacetylase 9 isoform 5

    See identical proteins and their annotated locations for NP_848512.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) has an alternate 3' sequence including the coding region and UTR, compared to variant 1. The resulting isoform 5 has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AB018287, AJ459808, AY197371
    Consensus CDS
    CCDS47553.1
    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (2) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6341011
    HDAC_classIIa; Histone deacetylases, class IIa

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p2 Primary Assembly

    Range
    18086942..18999521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011515631.1XP_011513933.1  

    Conserved Domains (2) summary
    cd10163
    Location:60149
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6611038
    HDAC_classIIa; Histone deacetylases, class IIa
  2. XM_011515626.1XP_011513928.1  

    Conserved Domains (2) summary
    cd10163
    Location:85174
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd10009
    Location:6861064
    HDAC9; Histone deacetylase 9
  3. XM_011515632.1XP_011513934.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd10009
    Location:6581036
    HDAC9; Histone deacetylase 9
  4. XM_011515633.1XP_011513935.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:614991
    HDAC_classIIa; Histone deacetylases, class IIa
  5. XM_011515627.1XP_011513929.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6561033
    HDAC_classIIa; Histone deacetylases, class IIa
  6. XM_011515629.1XP_011513931.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6531030
    HDAC_classIIa; Histone deacetylases, class IIa
  7. XM_011515634.1XP_011513936.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:609986
    HDAC_classIIa; Histone deacetylases, class IIa
  8. XM_011515630.1XP_011513932.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6511028
    HDAC_classIIa; Histone deacetylases, class IIa
  9. XM_011515628.1XP_011513930.1  

    Conserved Domains (2) summary
    cd10163
    Location:57143
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6551032
    HDAC_classIIa; Histone deacetylases, class IIa
  10. XM_011515647.1XP_011513949.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cl17011
    Location:658959
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  11. XM_011515650.1XP_011513952.1  

    Conserved Domains (2) summary
    cd10163
    Location:57146
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cl17011
    Location:658705
    Arginase_HDAC; Arginase-like and histone-like hydrolases
  12. XM_011515651.1XP_011513953.1  

    Conserved Domains (1) summary
    cl13614
    Location:57143
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
  13. XM_011515640.1XP_011513942.1  

    See identical proteins and their annotated locations for XP_011513942.1

    Conserved Domains (2) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:608985
    HDAC_classIIa; Histone deacetylases, class IIa
  14. XM_011515638.1XP_011513940.1  

    See identical proteins and their annotated locations for XP_011513940.1

    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (2) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6341011
    HDAC_classIIa; Histone deacetylases, class IIa
  15. XM_011515636.1XP_011513938.1  

    See identical proteins and their annotated locations for XP_011513938.1

    Conserved Domains (2) summary
    cd10163
    Location:38124
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6361013
    HDAC_classIIa; Histone deacetylases, class IIa
  16. XM_011515635.1XP_011513937.1  

    See identical proteins and their annotated locations for XP_011513937.1

    Conserved Domains (2) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6391016
    HDAC_classIIa; Histone deacetylases, class IIa
  17. XM_011515641.1XP_011513943.1  

    See identical proteins and their annotated locations for XP_011513943.1

    Conserved Domains (2) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:608985
    HDAC_classIIa; Histone deacetylases, class IIa
  18. XM_011515644.1XP_011513946.1  

    See identical proteins and their annotated locations for XP_011513946.1

    Conserved Domains (2) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd10009
    Location:603981
    HDAC9; Histone deacetylase 9
  19. XM_011515639.1XP_011513941.1  

    See identical proteins and their annotated locations for XP_011513941.1

    UniProtKB/Swiss-Prot
    Q9UKV0
    Conserved Domains (2) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6341011
    HDAC_classIIa; Histone deacetylases, class IIa
  20. XM_011515637.1XP_011513939.1  

    See identical proteins and their annotated locations for XP_011513939.1

    Conserved Domains (2) summary
    cd10163
    Location:38124
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6361013
    HDAC_classIIa; Histone deacetylases, class IIa
  21. XM_011515649.1XP_011513951.1  

    See identical proteins and their annotated locations for XP_011513951.1

    Conserved Domains (2) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6391016
    HDAC_classIIa; Histone deacetylases, class IIa
  22. XM_011515648.1XP_011513950.1  

    See identical proteins and their annotated locations for XP_011513950.1

    Conserved Domains (2) summary
    cd10163
    Location:38127
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:6391016
    HDAC_classIIa; Histone deacetylases, class IIa
  23. XM_011515643.1XP_011513945.1  

    See identical proteins and their annotated locations for XP_011513945.1

    Conserved Domains (2) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:608985
    HDAC_classIIa; Histone deacetylases, class IIa
  24. XM_011515642.1XP_011513944.1  

    See identical proteins and their annotated locations for XP_011513944.1

    Conserved Domains (2) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:608985
    HDAC_classIIa; Histone deacetylases, class IIa
  25. XM_011515646.1XP_011513948.1  

    Conserved Domains (2) summary
    cd10163
    Location:793
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd11681
    Location:600977
    HDAC_classIIa; Histone deacetylases, class IIa
  26. XM_011515645.1XP_011513947.1  

    See identical proteins and their annotated locations for XP_011513947.1

    Conserved Domains (2) summary
    cd10163
    Location:796
    ClassIIa_HDAC9_Gln-rich-N; Glutamine-rich N-terminal helical domain of HDAC9, a Class IIa histone deacetylase
    cd10009
    Location:603981
    HDAC9; Histone deacetylase 9

RNA

  1. XR_926952.1 RNA Sequence

Alternate CHM1_1.1

Genomic

  1. NC_018918.2 Alternate CHM1_1.1

    Range
    18127641..19037820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_058177.2: Suppressed sequence

    Description
    NM_058177.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.