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PDE4DIP phosphodiesterase 4D interacting protein [ Homo sapiens (human) ]

Gene ID: 9659, updated on 8-May-2016
Official Symbol
PDE4DIPprovided by HGNC
Official Full Name
phosphodiesterase 4D interacting proteinprovided by HGNC
Primary source
HGNC:HGNC:15580
See related
Ensembl:ENSG00000178104 HPRD:10482; MIM:608117; Vega:OTTHUMG00000013846
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MMGL; CMYA2
Summary
The protein encoded by this gene serves to anchor phosphodiesterase 4D to the Golgi/centrosome region of the cell. Defects in this gene may be a cause of myeloproliferative disorder (MBD) associated with eosinophilia. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2010]
Orthologs
Location:
1q12
Exon count:
56
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 1 NC_000001.11 (148808167..149033019)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (144851424..145076186, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene vesicle-trafficking protein SEC22b-like Neighboring gene nudix hydrolase 4 pseudogene 1 Neighboring gene uncharacterized LOC101929787 Neighboring gene uncharacterized LOC105371221 Neighboring gene uncharacterized LOC105371220 Neighboring gene profilin-1-like Neighboring gene neuroblastoma breakpoint family member 9

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NHGRI GWAS Catalog

Description
Identification of novel germline polymorphisms governing capecitabine sensitivity.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC75440, DKFZp781J054

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enzyme binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
cellular protein complex assembly ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
centrosome IDA
Inferred from Direct Assay
more info
PubMed 
centrosome ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
myofibril ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
myomegalin
Names
cardiomyopathy-associated protein 2
myomegalin/phosphodiesterase 4D interacting protein variant 8

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_027693.2 RefSeqGene

    Range
    86277..229844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001002810.3NP_001002810.1  myomegalin isoform 4

    See identical proteins and their annotated locations for NP_001002810.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) lacks multiple 3' exons but has an alternate 3' sequence compared to variant 1. The resulting isoform (4) is C-terminal truncated compared to isoform 1.
    Source sequence(s)
    AC239802, AW755251, BC025406, CB529851, DA764537, DA766011
    Consensus CDS
    CCDS72893.1
    UniProtKB/Swiss-Prot
    Q5VU43
    Related
    ENSP00000358353, OTTHUMP00000015726, ENST00000369347, OTTHUMT00000038862
    Conserved Domains (1) summary
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
  2. NM_001002811.2NP_001002811.2  myomegalin isoform 5

    See identical proteins and their annotated locations for NP_001002811.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) lacks multiple 5' and 3' exons but has an alternate 5' exon and an alternate 3' exon, compared to variant 1. The resulting isoform (5) has a shorter and distinct N-terminus and a truncated C-terminus compared to isoform 1.
    Source sequence(s)
    AB007946, R42452
    Consensus CDS
    CCDS72894.1
    UniProtKB/Swiss-Prot
    Q5VU43
    UniProtKB/TrEMBL
    A0A0C4DFQ0
    Related
    ENSP00000316434, OTTHUMP00000015725, ENST00000313431, OTTHUMT00000038861
    Conserved Domains (4) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    TIGR02168
    Location:4031095
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  3. NM_001002812.2NP_001002812.2  myomegalin isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) lacks multiple 3' exons and has an alternate 3' exon compared to variant 1. The resulting isoform (2) is C-terminal truncated compared to isoform 1.
    Source sequence(s)
    AL831815, AL833273, AW755251, BC078660, R42452
    Consensus CDS
    CCDS72890.1
    UniProtKB/Swiss-Prot
    Q5VU43
    UniProtKB/TrEMBL
    A0A0A0MRL8
    Related
    ENSP00000358355, OTTHUMP00000015724, ENST00000369349, OTTHUMT00000038860
    Conserved Domains (4) summary
    pfam07851
    Location:243337
    TMPIT; TMPIT-like protein
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
    pfam13514
    Location:399963
    AAA_27; AAA domain
    TIGR02168
    Location:30679
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  4. NM_001195260.1NP_001182189.1  myomegalin isoform 6

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in both UTRs and in the coding sequence compared to variant 1. The resulting isoform (6) is shorter at the N- and C-termini compared to isoform 1.
    Source sequence(s)
    AC239802, BC025406, BI550399, CB529851, DA766011
    UniProtKB/Swiss-Prot
    Q5VU43
    Conserved Domains (1) summary
    pfam07989
    Location:145
    Microtub_assoc; Microtubule associated
  5. NM_001195261.1NP_001182190.1  myomegalin isoform 7

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in both UTRs and in the coding sequence compared to variant 1. The resulting isoform (7) has a longer and distinct N-terminus and a shorter C-terminus compared to isoform 1.
    Source sequence(s)
    AC239802, BC025406, BG776644, CB529851, DA766011
    Consensus CDS
    CCDS72889.1
    UniProtKB/Swiss-Prot
    Q5VU43
    UniProtKB/TrEMBL
    A0A087WYE4
    Related
    ENSP00000481731, ENST00000464103
    Conserved Domains (1) summary
    pfam07989
    Location:1380
    Microtub_assoc; Microtubule associated
  6. NM_001198832.2NP_001185761.2  myomegalin isoform 8

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR and has multiple coding region differences, compared to variant 1. The resulting isoform (8) has a longer and distinct N-terminus and lacks two internal segments, compared to isoform 1.
    Source sequence(s)
    AA025132, AB007923, AC239802, BC078660, DA816062
    Consensus CDS
    CCDS72888.1
    UniProtKB/Swiss-Prot
    Q5VU43
    UniProtKB/TrEMBL
    A0A087WVF8
    Related
    ENSP00000479409, OTTHUMP00000276979, ENST00000618462, OTTHUMT00000038856
    Conserved Domains (5) summary
    pfam07851
    Location:309403
    TMPIT; TMPIT-like protein
    COG1196
    Location:4211206
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam06758
    Location:15121581
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:70143
    Microtub_assoc; Microtubule associated
    TIGR02168
    Location:69745
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  7. NM_001198834.3NP_001185763.3  myomegalin isoform 9

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9) has an alternate splice site in the last splice junction, compared to variant 1. The resulting isoform (9) has a longer and distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AA025132, AB007923, AB007946, AC239802, AL833273, AW755251, BX647660
    Consensus CDS
    CCDS72892.1
    UniProtKB/Swiss-Prot
    Q5VU43
    UniProtKB/TrEMBL
    A0A0A0MRM1
    Related
    ENSP00000358363, OTTHUMP00000015721, ENST00000369356, OTTHUMT00000038857
    Conserved Domains (4) summary
    pfam07851
    Location:243337
    TMPIT; TMPIT-like protein
    pfam06758
    Location:15561625
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
    TIGR02168
    Location:5679
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  8. NM_014644.5NP_055459.5  myomegalin isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1.
    Source sequence(s)
    AA025132, AB007923, AB007946, AC239802, AL833273, AW755251
    Consensus CDS
    CCDS72891.1
    UniProtKB/Swiss-Prot
    Q5VU43
    UniProtKB/TrEMBL
    A0A0A0MRM0
    Related
    ENSP00000358360, OTTHUMP00000015722, ENST00000369354, OTTHUMT00000038858
    Conserved Domains (5) summary
    pfam07851
    Location:243337
    TMPIT; TMPIT-like protein
    pfam06758
    Location:15561625
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
    cl03951
    Location:170270
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:5679
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  9. NM_022359.5NP_071754.3  myomegalin isoform 3

    See identical proteins and their annotated locations for NP_071754.3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) has alternate 5' and 3' sequences and lacks multiple 3' exons compared to variant 1. The resulting isoform (3) has a longer and distinct N-terminus and a truncated C-terminus compared to isoform 1.
    Source sequence(s)
    AC239802, BC025406, CB529851, DA766011
    Consensus CDS
    CCDS72887.1
    UniProtKB/Swiss-Prot
    Q5VU43
    Related
    ENSP00000482121, OTTHUMP00000276975, ENST00000530472, OTTHUMT00000038863
    Conserved Domains (1) summary
    pfam07989
    Location:141214
    Microtub_assoc; Microtubule associated

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p2 Primary Assembly

    Range
    148808167..149033019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011510172.1XP_011508474.1  

    Conserved Domains (6) summary
    pfam07851
    Location:380474
    TMPIT; TMPIT-like protein
    pfam06758
    Location:16931762
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:141214
    Microtub_assoc; Microtubule associated
    pfam15272
    Location:539660
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl03951
    Location:307407
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:4921248
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  2. XM_011510173.1XP_011508475.1  

    Conserved Domains (6) summary
    pfam07851
    Location:380474
    TMPIT; TMPIT-like protein
    pfam06758
    Location:16921761
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:141214
    Microtub_assoc; Microtubule associated
    pfam15272
    Location:539660
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl03951
    Location:307407
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:4921248
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  3. XM_011510175.1XP_011508477.1  

    UniProtKB/TrEMBL
    A0A075B749
    Related
    ENSP00000462316, OTTHUMP00000276978, ENST00000585156, OTTHUMT00000384689
    Conserved Domains (5) summary
    pfam07851
    Location:380474
    TMPIT; TMPIT-like protein
    pfam06758
    Location:16921761
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:141214
    Microtub_assoc; Microtubule associated
    cl03951
    Location:307407
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:140816
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  4. XM_011510176.1XP_011508478.1  

    Conserved Domains (5) summary
    pfam07851
    Location:380474
    TMPIT; TMPIT-like protein
    COG1196
    Location:4921277
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam06758
    Location:15831652
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:141214
    Microtub_assoc; Microtubule associated
    TIGR02168
    Location:140816
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  5. XM_006711646.1XP_006711709.1  

    Conserved Domains (5) summary
    pfam07851
    Location:309403
    TMPIT; TMPIT-like protein
    pfam06758
    Location:16221691
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:70143
    Microtub_assoc; Microtubule associated
    cl03951
    Location:236336
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:69745
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  6. XM_006711650.2XP_006711713.1  

    Conserved Domains (5) summary
    pfam07851
    Location:246340
    TMPIT; TMPIT-like protein
    pfam06758
    Location:15591628
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:1380
    Microtub_assoc; Microtubule associated
    cl03951
    Location:173273
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:33682
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  7. XM_006711651.1XP_006711714.1  

    Conserved Domains (5) summary
    pfam07851
    Location:243337
    TMPIT; TMPIT-like protein
    pfam06758
    Location:15561625
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
    cl03951
    Location:170270
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:5679
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  8. XM_006711652.1XP_006711715.1  

    Conserved Domains (5) summary
    pfam07851
    Location:243337
    TMPIT; TMPIT-like protein
    pfam06758
    Location:15551624
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
    cl03951
    Location:170270
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:5679
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  9. XM_011510179.1XP_011508481.1  

    Conserved Domains (5) summary
    pfam07851
    Location:243337
    TMPIT; TMPIT-like protein
    pfam06758
    Location:15551624
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07989
    Location:577
    Microtub_assoc; Microtubule associated
    cl03951
    Location:170270
    CDC37_N; Cdc37 N terminal kinase binding
    TIGR02168
    Location:5679
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  10. XM_011510178.1XP_011508480.1  

    Conserved Domains (4) summary
    pfam07851
    Location:30124
    TMPIT; TMPIT-like protein
    pfam06758
    Location:13431412
    DUF1220; Repeat of unknown function (DUF1220)
    pfam15272
    Location:189310
    BBP1_C; Spindle pole body component BBP1, C-terminal
    TIGR02168
    Location:27825
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  11. XM_005277442.3XP_005277499.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:548849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181282
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  12. XM_006711642.2XP_006711705.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:548849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181282
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  13. XM_005272981.3XP_005273038.2  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181274
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  14. XM_005277443.3XP_005277500.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181282
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  15. XM_006711644.2XP_006711707.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181282
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  16. XM_006711645.2XP_006711708.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181282
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  17. XM_006711649.2XP_006711712.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181274
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  18. XM_011510174.1XP_011508476.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181274
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  19. XM_006711643.2XP_006711706.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17181787
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:548849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181282
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  20. XM_006711648.2XP_006711711.1  

    Conserved Domains (8) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG0419
    Location:9901645
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:16091678
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:548849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181228
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  21. XM_005277446.3XP_005277503.1  

    Conserved Domains (7) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    COG1340
    Location:414714
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    cl19827
    Location:542849
    YheB; Uncharacterized membrane protein YheB, UPF0754 family [Function unknown]
    TIGR02168
    Location:5181274
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  22. XM_011510177.1XP_011508479.1  

    Conserved Domains (5) summary
    pfam07851
    Location:406500
    TMPIT; TMPIT-like protein
    pfam06758
    Location:17191788
    DUF1220; Repeat of unknown function (DUF1220)
    pfam07776
    Location:474
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam15272
    Location:565686
    BBP1_C; Spindle pole body component BBP1, C-terminal
    TIGR02168
    Location:4031201
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  23. XM_006711655.2XP_006711718.1  

    Conserved Domains (2) summary
    pfam06758
    Location:563632
    DUF1220; Repeat of unknown function (DUF1220)
    cl02488
    Location:8771024
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 Alternate CHM1_1.1

    Range
    150176307..150401145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)